result

Gene information

Detail information of AfisC4G00635

Location

Gene	Chr	Start	End	Strand
AfisC4G00635	chr4	107174938	107177434	+

Sequences

CDS

>AfisC4G00635
ATGGAGAGATATGAAGTGATAAAAGATATCGGTTCTGGGAATTTTGGGGTTGCCAAATTGGTCAGGGATATATGGACTAAAGAGTTCTATGCTGTCAAATTTATTGAGAGAGGAGAAAAGGTAGATGAGCATGTACAGAGAGAGATAATGAACCACAGATCATTGAAGCATCCAAATATAGTGAGATTCAAGGAGGTTTTATTAACTCCCACGCATCTTGCTATAGTCATGGAATATGCATCTGGAGGCGAACTATTTGAGAGGATATGTGAGGCTGGCAAATTTAGTGAAGATGAGGCAAGGTTTTTCTTTCAACAATTGATATCGGGAGTAAGCTACTGCCATTCCATGCAAATTTGCCATAGAGACCTTAAATTAGAGAATACACTCTTGGATGGCAGCACAGCTCCACGTCTCAAAATTTGCGATTTTGGATATTCTAAGTCATCGGTACTACATTCGCAACCAAAATCAACTGTTGGAACTCCGGCGTACATTGCACCTGAGGTTTTATCTAGAAAGGAATATGATGGAAAGATTGCAGATGTTTGGTCTTGTGGTGTAACTCTATATGTAATGTTGGTTGGTGCATATCCTTTTGAAGACCCAGACGATCCAAGAAATTTTCGAAAGACACTTGGAAGAATTCTAAGTGTCCAGTACTCAATTCCAGACTATGTTAGGGTGTCAAATGAATGCAGGCATCTTCTTTCTCGGATTTTTGTAGCAAATCCTGAAAAGAGAATCACAATACCGGAAATAAAAGTGCATCCTTGGTTTCAAAAAAATCTACCAATAGAGATGACCGATGAGTATCAAAGCAACATGCACAATGACACGGACTCTGAGTCACAAAGTGTTGAAGAAATCAGTGCGATTATTCAAGAAGCAAGAAAGCCAGTTGAAGGAGCTCGAATTGGAGGAGGAAGGCTTATAGTAGAGGGCAGCACGGACCTTGATGACATGGACGATGATATGGATGATGTCGAAACTAGTGGTGATTTTGTTTGTGCTCTTTAG

Protein

Gene

>AfisC4G00635
AAAACGAGTGATAGAAGCAGTGCTCGCATCACTTCACTCCTCCAAAAATAAAAAAGAGCACTCATTTGTCTTTCTATATTGCTTCTACTTCCTTCTCTCTTCGTTTATAATGTTTTCTTGCAAGCAAACATTAAATTATAGAACATAAAATCATATAAAGGTAGAATCTGGTTATGATTGTTTTGAAATGGAGAGATATGAAGTGATAAAAGATATCGGTTCTGGGAATTTTGGGGTTGCCAAATTGGTCAGGGATATATGGACTAAAGAGTTCTATGCTGTCAAATTTATTGAGAGAGGAGAAAAGGTGTCATCATGCTATTAACTTCTTAAGGATATTGATAAATTTATGCCTGTAACGTCAAATTCATTCTAATTTTGGGTGTTTTTGTTGTGTTATGTTTGCTGTGCAGGTAGATGAGCATGTACAGAGAGAGATAATGAACCACAGATCATTGAAGCATCCAAATATAGTGAGATTCAAGGAGGTGAGGACCTATCATATCTTCATTGACTCACAACCATCTAATTAAATAGATTATGTAAAACTATCACCTTTATGTGGATTGAAAGCTAAAGCCTTGATTATGAAAATATTGCCTTTTTGTCTTTCTTTGAAACTAATTTCTCTTTGGTTTTGTGTTATGCAACTTGGAAACTAAATTAACATGTGCAATATGTCTACATTAAACATTTCAGGTTTTATTAACTCCCACGCATCTTGCTATAGTCATGGAATATGCATCTGGAGGCGAACTATTTGAGAGGATATGTGAGGCTGGCAAATTTAGTGAAGATGAGGTAACAGTAACACATAATTTACTGATGCCTATATCTTTTGCATCATTGAATATCTAACTATTTATTACGTACCTTCATGATATAACAACAGGCAAGGTTTTTCTTTCAACAATTGATATCGGGAGTAAGCTACTGCCATTCCATGGTAGCTTTTCTAGGCTTAGTTTACTTCTACTATATTATTTAATCAAACTAGTTCAACCTTTTCTGTTTCTTAATGTGGCAGCAAATTTGCCATAGAGACCTTAAATTAGAGAATACACTCTTGGATGGCAGCACAGCTCCACGTCTCAAAATTTGCGATTTTGGATATTCTAAGGTTTTGTTCTATTCTACTCATTTTAATCCGTAATATTCAGTATCACTGAAGAAAAATACTTCACTTCTGTAATAATTCTATAGTCATCGGTACTACATTCGCAACCAAAATCAACTGTTGGAACTCCGGCGTACATTGCACCTGAGGTTTTATCTAGAAAGGAATATGATGGAAAGGCAAGCTTTATTTGATACCCTTAAATCTTCAACAAAATATGATATTGATAATAAAAACTCACTTTGGCATATACAAATATTTGAAATTAGATTGCAGATGTTTGGTCTTGTGGTGTAACTCTATATGTAATGTTGGTTGGTGCATATCCTTTTGAAGACCCAGACGATCCAAGAAATTTTCGAAAGACACTTGGAGTGAGTTATATTATTTAGCATTTGGTGCATTTATTTTACAAGGAGTATTCTTTCATATAATTTGTATTATGACAGAGAATTCTAAGTGTCCAGTACTCAATTCCAGACTATGTTAGGGTGTCAAATGAATGCAGGCATCTTCTTTCTCGGATTTTTGTAGCAAATCCTGAAAAGGTATCTAATGTCTCAATCTCAACATAATTATATACCCACATTCTAATATGACAACCAATGTTTTTTTATAATGAATATCCTGCGTAGAGAATCACAATACCGGAAATAAAAGTGCATCCTTGGTTTCAAAAAAATCTACCAATAGAGATGACCGATGAGTATCAAAGCAACATGCACAATGACACGGACTCTGAGTCACAAAGTGTTGAAGAAATCAGTGCGATTATTCAAGAAGCAAGAAAGCCAGTTGAAGGAGCTCGAATTGGAGGAGGAAGGCTTATAGTAGAGGGCAGCACGGACCTTGATGACATGGACGATGATATGGATGATGTCGAAACTAGTGGTGATTTTGTTTGTGCTCTTTAGTTAATTATCATATATCTTTGATATTCTTAAATGTTATATTGTATTGTAATAGTTGAGACCATCAATTCGATATATGATAATATATATGGCCGTCATGTTTATGATAATTTATATTGCTTGTGGATCCAAGAAGTTCATAAAAGATCATGGGTAGGGTTGTTATAAAGGTGTTTATCCGCAAGTGGTAACTGGCACATGGTAATGCCTTGAAACTGAAGGAAGCTCGAACGGTTCATATACAAGGAAGCGTCTACATTTTATATTTTTTGCTAGTTGTAGTGATACTAAAGGTATTCCTTTCTACGAAGAACAGGATGTCCTATCTTTATTGTAATAGCCCATACTGCGTGACCACTCTTCTTATTGTGGATTCAAATTGTAATAGTTGAAGCTGGTTCTGTTTACCATGAATGCATAGTAAATTGTTTTAGCACTACAGTTGAGGAATAAATAAACTGAAATTGTC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020255773.1	1.9e-172	serine/threonine-protein kinase SAPK2-like isoform X1
Swissprot	Q0D4J7.1	2.3e-162	stress-activated protein kinase 2
trEMBL	A0A8B7D4S6	2.2e-170	serine/threonine-protein kinase SAPK2 isoform X2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G78290.2	80.92	2e-147	518	SNRK2-8;SNRK2.8;SRK2C	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G00635	AT1G78290.3	304	54	2	1	304	1	300	80.92	2e-147	518
AfisC4G00635	AT1G78290.2	304	54	2	1	304	1	300	80.92	2e-147	518
AfisC4G00635	AT4G33950.1	321	78	2	2	321	19	337	74.77	2e-143	505

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	4	260	243.6	2.1e-72

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0003729	F	mRNA binding
GO:0042742	P	defense response to bacterium
GO:0005829	C	cytosol
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005985	P	sucrose metabolic process
GO:0006636	P	unsaturated fatty acid biosynthetic process
GO:0040007	P	growth
GO:0009414	P	response to water deprivation
GO:0009651	P	response to salt stress
GO:0009739	P	response to gibberellin
GO:0009789	P	positive regulation of abscisic acid-activated signaling pathway
GO:0009931	F	calcium-dependent protein serine/threonine kinase activity
GO:0010029	P	regulation of seed germination
GO:0019432	P	triglyceride biosynthetic process
GO:0046777	P	protein autophosphorylation
GO:0048366	P	leaf development
GO:0048527	P	lateral root development
GO:0070300	F	phosphatidic acid binding
GO:2000377	P	regulation of reactive oxygen species metabolic process
GO:0080167	P	response to karrikin
GO:1902456	P	regulation of stomatal opening

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14498	SNRK2; serine/threonine-protein kinase SRK2	EC:2.7.11.1	MAPK signaling pathway - plant	ko04016
K14498	SNRK2; serine/threonine-protein kinase SRK2	EC:2.7.11.1	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network