result

Gene information

Detail information of AfisC4G02067

Location

Gene	Chr	Start	End	Strand
AfisC4G02067	chr4	386824779	386826282	+

Sequences

CDS

>AfisC4G02067
ATGGAAGGCCTTGATTCCCTTGACCCTTTTCTGGATATCCCTGAATACATGTACGATGAAGAAGCAATTCAAAGTTGCATGACTTCACTTACGGAATCGCTTAATGAAGTCGAACAAAATAACTTGCCTCCATTAAACAACGAAGAAGTAGCAGCCCCTTTGGATATTTCAATCCAAAACTTCAATAGCCAATTTGAACAGAATGACTTGCCACCATTAAACAACGAAGAAGTTGTTGCCCCTTTAGACATTTCAGTCGCAGACTTTGAAGTACTAAATAACTTGCTTCTTTCCTTACCTAATTTGCCCGATTGTCACGAATGCATATTGTTAAGAGAAATCGTTCACACTAACGGAGTAGAAAACATGAAGCTTTTAGTGCATGGAGGTAAAGACCAATTTTTTCATGCAATTTGCCAGGTCGAGGGAAGCATTGATGGAATGCAATCAGTCGTGGAACCCTCATTTGTAGATCTTCGAGAATTTAGCTATGATCAAGTAAAGAAATTCCTGATAGATTATGGACTGCTGCGACTGCAGAATGGATATGTGCTAATTCAGGATTCAGTTTCAAGCTTTTACGATGCATTATCAGTGAAAATCGACTGTAATATTATGCTACCAATTCTACATGAACAAGCAGTTACATCTCAGTCAGCGCCAGCAGTTTTGAACAACCTAATGCAATTACCTGTTAATGATTCCAGTAGAACCGAAAAGACAGGAATAGCCGCCCAGAGGGAGAGAACAGCAAACCTGCATATAAGCGAATTTGCTGGCTATTTCCACCTTCGACTAGTAGATGCTGCTAAGGAGATTGGAGTTTGTTCCACGGTCCTAAAGAAAGTTTGTCGTAAATACGGCATGAAAAGATGGCCTTATCGAAAGGTATCAAGTATCGATAAAAAGATCAACAAAATGAAGAATGATTTAAGGGGCAGAGGCGGACAAGGAGCAGCAGAGATTGAAGCAGAGATCGAGAAACTTATGGCGGAAAGAGCAAATTTATGTCTTGGCTATAATCCTTATAGAACACCAAATATTTAA

Protein

Gene

>AfisC4G02067
TTCCACCGTCCCTCGCCCTTGGCCATTGACGGCCAAGGGACCTCTCCTCCAAAATGGAAGGCCTTGATTCCCTTGACCCTTTTCTGGATATCCCTGAATACATGTACGATGAAGAAGCAATTCAAAGTTGCATGACTTCACTTACGGAATCGCTTAATGAAGTCGAACAAAATAACTTGCCTCCATTAAACAACGAAGAAGTAGCAGCCCCTTTGGATATTTCAATCCAAAACTTCAATAGCCAATTTGAACAGAATGACTTGCCACCATTAAACAACGAAGAAGTTGTTGCCCCTTTAGACATTTCAGTCGCAGACTTTGAAGTACTAAATAACTTGCTTCTTTCCTTACCTAATTTGCCCGATTGTCACGAATGCATATTGTTAAGAGAAATCGTTCACACTAACGGTATCTCAGTATTTTCTCTTGTTTTCATATACATGTATAAATTATGTCTATAAATTGTTTATTTACTGATCTGTAGGAGTAGAAAACATGAAGCTTTTAGTGCATGGAGGTAAAGACCAATTTTTTCATGCAATTTGCCAGGTCGAGGGAAGCATTGATGGAATGCAATCAGTCGTGGAACCCTCATTTGTAGAGTAAGCTTCAGCATTCCAGATTTTGTCCTTTGCTTTCAAGAAACGACTTATAAGAAAAGTCTTTGTTTATTAAAGCAGTGTAGTTTTTAGATTAGTAACAAGAAGTTGTTATTTGTGCATGTTTTTGTGCAGTCTTCGAGAATTTAGCTATGATCAAGTAAAGAAATTCCTGATAGATTATGGACTGCTGCGACTGCAGAATGGATATGTGCTAATTCAGGATTCAGTTTCAAGCTTTTACGATGCATTATCAGTGAAAATCGACTGTAATATTATGCTACCAATTCTACATGAACAAGCAGTTACATCTCAGTCAGCGCCAGCAGTTTTGAACAACCTAATGCAATTACCTGTTAATGATTCCAGTAGAACCGAAAAGACAGGAATAGCCGCCCAGGTAATTTTCTATGTCATATTTGCAGGTTATACTTATATTATGTATGAAACTATAAACATATATTTTGTATAAATATCAGAGGGAGAGAACAGCAAACCTGCATATAAGCGAATTTGCTGGCTATTTCCACCTTCGACTAGTAGATGCTGCTAAGGAGATTGGAGTTTGTTCCACGGTCCTAAAGAAAGTTTGTCGTAAATACGGCATGAAAAGATGGCCTTATCGAAAGGTTTGATTTTCTATCTCTCTTTTACCTTCTCATAATCATTTTTCCATAAACCAAAAACATCATTAATATGAAAAAAGTTACAGGTATCAAGTATCGATAAAAAGATCAACAAAATGAAGAATGATTTAAGGGGCAGAGGCGGACAAGGAGCAGCAGAGATTGAAGCAGAGATCGAGAAACTTATGGCGGAAAGAGCAAATTTATGTCTTGGCTATAATCCTTATAGAACACCAAATATTTAACAATCAATATATTCATTTTGTATTGACTCCAAAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020255194.1	1.8e-56	uncharacterized protein LOC109832169
Swissprot	Q9LE38.1	3.0e-08	Nodule inception protein-like protein 4
trEMBL	A0A5P1F9Z6	1.3e-56	RWP-RK domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G17150.1	36.26	3e-11	66.2	NLP1	Plant regulator RWP-RK family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G02067	AT2G17150.1	91	55	2	235	324	593	681	36.26	3e-11	66.2
AfisC4G02067	AT4G35590.1	105	62	2	240	336	224	328	33.33	3e-11	66.2
AfisC4G02067	AT3G59580.2	144	100	3	189	331	477	615	26.39	3e-11	66.2

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02042.12	RWP-RK	Family	252	300	70.4	7.9e-20

Gene Ontology

Accession	Ontology	Name
GO:0006355	P	regulation of transcription, DNA-templated
GO:0051302	P	regulation of cell division

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network