Detail information of AfisC4G02288


Location
GeneChrStartEndStrand
AfisC4G02288chr4434225882434226667+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020258644.11.5e-60LOW QUALITY PROTEIN: nodulation-signaling pathway 2 protein-like
SwissprotQ2PEG7.13.8e-48Transcription initiator for nodulation
trEMBLA0A6A4LEI49.1e-55GRAS domain-containing protein (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G08250.159.332e-43 172GRAS family transcription factor

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03514.11GRASFamily108252139.31.4e-40

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009651Presponse to salt stress
GO:0009740Pgibberellic acid mediated signaling pathway
GO:0010029Pregulation of seed germination
GO:0044702Psingle organism reproductive process
GO:0044763Psingle-organism cellular process
GO:0048519Pnegative regulation of biological process
GO:0048608Preproductive structure development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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