result

Gene information

Detail information of AfisC4G02867

Location

Gene	Chr	Start	End	Strand
AfisC4G02867	chr4	548189503	548192408	-

Sequences

CDS

>AfisC4G02867
ATGCCTGCTCCGCTCTATCGCCATCGCCCTTGCTTTCTACCGCTGAGTAAAGTGCATGAGATCCTTGAAGAGACTCATTTTTTGTTAGGAGGTTTCTGCGTTGCTGATTTTTTCCCTCATTTGGCTTGGGTCGAAAGATTCACCGGGTTGAAGAAGAAATTGGAGAAAAACTTTGGGAAATTAGATGCATATTTCAGCGAAATGATCGAGGAACATTTGAGTGGAAGGAAGCAAGAAGAGGAGGTTGAGGATTTAGTAGATGTGCTGCTTAGACTTGGAAATAATTCTAGTTATGGAGACATCTTCAGTACCATGAATCACATTAAGGCTCTCATCATGGCAGAGAAAGAGTTTAAAGTAGAGGTTGAAGCAATCGGTAATGTAAGGCACAAGAACCTTGTGGGTCTTCTGGGATTTTGCGCTGAGGGTTCTCAAAGGATGCTTGTATACGAATATGTTGAAAATGGTAATTTAGAGCAGTGGTTACATGGAGACATCGGGCTAGTCAGTCCATTAACCTGGGATATTAGGATGAAAATAGCCATTGGAACTGCAAAAGGAATAGCATATTTACATGAAGGTTTAGAGCCTAAAGTTGTGCATCGAGATATCAAATCAAGCAATATTCTCCTGGATAAGCATTGGAATCCTAAAGTATCAGATTTTGGATTAGCGAAGCTACTGGGGAGTGGATCGAGCTATGTTACTACACGTGTTATGGGAACTTTCGGGTTCGTTCAACTTCTTATACTTCCACATAATCATACACGCTATAATATTTTGTTAACAGATTATCGACTCTCATGTTTCTGTAGTTATGTCGCACCTGAATATGCTTGCACTGGTATGCTTAATGAAGCAAGTGATATGTACAGTTTTGGAGTGCTGCTAATGGAATTGATTACGGGGCGTAGCCCTGTTGACAACAAAAGACCACCTGGAGAGGTAGTAAACTTGGTGGATTGGTTTAAAGGAATGGTAGGCAGTAAAAGAGGAGAAGAAGTGATGGACAAGCGAATTGATTCTCAACCCTCACCAAGAGCTTTAAAAAGAGTTTTGTTGGTTTGTTTACGGTGCATTGATTCAGATGCTCATAAGAGACCTAAGATGTGGCAAATTGCTCATATGCTCGAAGGAGATGAATTTCCTTTTCGTGCGGAACATCGATCAACTAGAGAATCCTTCATGCCAACAAGTCCTTTAGTCCTACCAAGGTTAGCTCGATAA

Protein

Gene

>AfisC4G02867
ATGCCTGCTCCGCTCTATCGCCATCGCCCTTGCTTTCTACCGCTGAGGTAAGCATCAATCCATACTGCCAAATTACATTACCCCTTTTTATCCGGTGATAAACATGGAGGTGGTGGTTATGAAGGAAGCAGTAAAGTGCATGAGATCCTTGAAGAGACTCATTTTTTGTTAGGAGGTTTCTGCGTTGCTGATTTTTTCCCTCATTTGGCTTGGGTCGAAAGATTCACCGGTATCTAACATATCTTCTAACGAATCTTTGTATAATTTCTGTTTTGTATCTCAGTTTCCAAACATCTACATACATGTAATAGCCAATTTAAAATAAATTGTTGTTACTTGTTAGCATAGCAAGGTAAGAACCTAACCTTAGAGAGAAGGGCATTGTGTTCAGGGAACAAGAATTTTCATTTATTAATTACGTGTTAGATTCTCAATAGTGTTTATGATATCTGGTATAGGGTTGAAGAAGAAATTGGAGAAAAACTTTGGGAAATTAGATGCATATTTCAGCGAAATGATCGAGGAACATTTGAGTGGAAGGAAGCAAGAAGAGGAGGTTGAGGATTTAGTAGATGTGCTGCTTAGACTTGGAAATAATTCTAGTTATGGAGACATCTTCAGTACCATGAATCACATTAAGGCTCTCATCATGGTATGTCTTATTTGTTTGATTGTTGCATATATAAACTACATGGATGGATATGCATGCACATTACACACAGAAGATATGCATAGTGAAAATAATGAAATACAAAGATCATGAACATTTCATCATTTAGAGGTTGAATGGCACCTTTTTCATGTATTGAGTTACAGTACGTCAAATATCACAAAATTTTAAAGATGCTTAATCTAAATTATGATTATCATGTCCAAGAAAATAAGACCATCGACCACCATGTCCTACTGTGAGTTTTTTTCTTTCTCCCACAATTTTTGCAATTACTATAGATCAAATTTTAGCTCACATAATACTATACTAATTGACCATAAATTTGATACAGTCCCAGGTTAGAAAGTTTTATATTTTGATCAAACTTGATTCACAAAAATATAATAATAATTATTATATTATTAATATTATACCTATTGATCATCTTTGTCCTTTTAATGCTATGAGATATACAATCAACTTTTAAAAAAATACTAAAGCAACTGCGACCTTTTTTTGCACTTTTAGTAGATTTAATATATGATCTAACTATTAGAGTTCAAATTATGCAGCTGAAAAATATGTTCACATTAGTTTGTACTCACTGTATTATAGTTAACTATGCTAAGTTTTCTTCATAGGTAGCTCAATAAGTTAACTATACAAATTTAATGGACGGTCTTATGAATTGCGTTTGTAAGTCAGTAGGCTTGTGGAAAAAACTTTTGCAGGGGACAGGCAGAGAAAGAGTTTAAAGTAGAGGTTGAAGCAATCGGTAATGTAAGGCACAAGAACCTTGTGGGTCTTCTGGGATTTTGCGCTGAGGGTTCTCAAAGGTGAACTATAATTTTTACATCCTTTTCATTTTCAACATATACTGCATTCCATAGTTATTGAAAAAAAAATCATCTTTTGCATATAGGAGTCTGTTTTAAGCATACTATGTACACTCAATTTTTTGATCTATTGAGTTAATTTCAGGTACCATGAATATTTTTTTTTTACTATAACATAAGTAGTTAATTAGCTCCTGCTCTTATCCAGGATGCTTGTATACGAATATGTTGAAAATGGTAATTTAGAGCAGTGGTTACATGGAGACATCGGGCTAGTCAGTCCATTAACCTGGGATATTAGGATGAAAATAGCCATTGGAACTGCAAAAGGGTAATCATCCTCTATTTATTTTCATTTTCTTGTACATTAAAAGCAGAAACCCAAAACAATTACTTTCAGACAATTATCATATTACTCTCAACTCATAACCCCATTGTACTTGTTACAACCCTTTCAACGTGTTCCTCTCTTTCCTATACATACAGAATAGCATATTTACATGAAGGTTTAGAGCCTAAAGTTGTGCATCGAGATATCAAATCAAGCAATATTCTCCTGGATAAGCATTGGAATCCTAAAGTATCAGATTTTGGATTAGCGAAGCTACTGGGGAGTGGATCGAGCTATGTTACTACACGTGTTATGGGAACTTTCGGGTTCGTTCAACTTCTTATACTTCCACATAATCATACACGCTATAATATTTTGTTAACAGATTATCGACTCTCATGTTTCTGTAGTTATGTCGCACCTGAATATGCTTGCACTGGTATGCTTAATGAAGCAAGTGATATGTACAGTTTTGGAGTGCTGCTAATGGAATTGATTACGGGGCGTAGCCCTGTTGACAACAAAAGACCACCTGGAGAGGTAGTTCAAAATTATACTCTCAACTTATGATTGTATTCATTTCATATCTCATGTAACATTGGCAAGCTGTGAGAACAAATACTACTTCCTTTGGTCAACACCATACAAAAAGGGTGCATCAATAATTAGCACATGAAATATCGAAGTATTTACTGATATTACTCGTATTGTCAAAATATAGGTAAACTTGGTGGATTGGTTTAAAGGAATGGTAGGCAGTAAAAGAGGAGAAGAAGTGATGGACAAGCGAATTGATTCTCAACCCTCACCAAGAGCTTTAAAAAGAGTTTTGTTGGTTTGTTTACGGTGCATTGATTCAGATGCTCATAAGAGACCTAAGATGTGGCAAATTGCTCATATGCTCGAAGGAGATGAATTTCCTTTTCGTGCGGTATTATCTCTTTTTATATATTTATCATATAGTAGATTATAATAAACTTTTGGTTTTACAATTGCTAAGTGCATTGTTATGATGCAGGAACATCGATCAACTAGAGAATCCTTCATGCCAACAAGTCCTTTAGTCCTACCAAGGTTAGCTCGATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008785669.1	3.2e-121	probable receptor-like serine/threonine-protein kinase At4g34500
Swissprot	Q6NKZ9.1	3.0e-116	Probable receptor-like serine/threonine-protein kinase At4g34500
trEMBL	A0A8B7BUH0	2.3e-121	probable receptor-like serine/threonine-protein kinase At4g34500

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G34500.1	70.23	4e-118	421		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G02867	AT4G34500.1	299	58	3	97	393	165	434	70.23	4e-118	421
AfisC4G02867	AT1G01540.2	280	62	2	114	393	191	441	67.50	9e-107	384
AfisC4G02867	AT4G01330.1	382	109	6	22	393	125	449	53.93	1e-104	377

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	114	375	116.9	8.6e-34

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005634	C	nucleus
GO:0007166	P	cell surface receptor signaling pathway
GO:0019722	P	calcium-mediated signaling
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009845	P	seed germination
GO:0010068	P	protoderm histogenesis
GO:0019901	F	protein kinase binding
GO:0042335	P	cuticle development
GO:0046777	P	protein autophosphorylation
GO:0048364	P	root development
GO:0048367	P	shoot system development
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway
GO:1905393

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network