Detail information of AfisC4G03304


Location
GeneChrStartEndStrand
AfisC4G03304chr4631437264631448745-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020263134.11.0e-218SNF2 domain-containing protein CLASSY 3-like
SwissprotF4I8S3.12.5e-153Protein CHROMATIN REMODELING 31
trEMBLA0A5P1F4K07.3e-219Helicase ATP-binding domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G05490.143.329e-160 561chr31chromatin remodeling 31

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Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00176.20SNF2_NFamily65788474.26.8e-21
PF00271.28Helicase_CFamily1036114355.36.3e-15

Gene Ontology
AccessionOntologyName
GO:0051276Pchromosome organization
GO:0003676Fnucleic acid binding
GO:0017111Fnucleoside-triphosphatase activity
GO:0006302Pdouble-strand break repair
GO:0006306PDNA methylation
GO:0006310PDNA recombination
GO:0006325Pchromatin organization
GO:0007049Pcell cycle
GO:0016246PRNA interference
GO:0031981Cnuclear lumen
GO:0032268Pregulation of cellular protein metabolic process
GO:0032991Cmacromolecular complex
GO:0034645Pcellular macromolecule biosynthetic process
GO:0042221Presponse to chemical
GO:0043232Cintracellular non-membrane-bounded organelle
GO:0044271Pcellular nitrogen compound biosynthetic process
GO:0044702Psingle organism reproductive process
GO:0048522Ppositive regulation of cellular process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0060147Pregulation of posttranscriptional gene silencing
GO:0060966Pregulation of gene silencing by RNA

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K10875RAD54L, RAD54; DNA repair and recombination protein RAD54 and RAD54-like proteinEC:3.6.4.- Homologous recombinationko03440

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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