result

Gene information

Detail information of AfisC4G03373

Location

Gene	Chr	Start	End	Strand
AfisC4G03373	chr4	645161008	645163539	-

Sequences

CDS

>AfisC4G03373
ATGTTAAAATCATCTACCAACATGAAAAATTTAACTTCTCTTCTATATCTTATATATCTCATTCTATTCACGAAAATCTCAACATCTCAAATCAGTACGCTTTCAAAAGGATCATCTCTTTCGGTAGAAGACAATTCAAACCCATTTTTAGTCTCAACTAAAAACAGATTCAAATGTGGCTTCTATGAAATCGGCACCAATGCTTACATCTTCGCAATATGGTATTCAAAATCAAACAATACTATCGCATGGACCGCAAATCGCGATCAACCCGTAAATGGCCATGGTTCCAAAATCGAATTCCTAAAGGATGGTTATATGTCATTAAAAGATTACGATGGAAGTACAGTATGGAGCACCAATACAAGCTCAACTTCAGAAAAAGTGTCACTTTTGGATACAGGTAATCTTGTGATCACCGATTTCAGTGGTAAAATTATATGGCAAAGTTTTGACTTCCCAACTGATACCATTCTGCCTATGCAAACAATAACCAAAAATACAAAACTAACATCTGCCTCTACTAAAGGCTCGGTATCCTCTGGCTATTACAGTTTACTTTTTGACAATGACAATATATTGAAACTGATATACAATGGACCTGAGATTTCCAGCATCTACTGGCCTAACCCTGAAACCCAGGTGTTTCAGAATGGAAGAACTAATTACAACAGCAGCAGAATTGGAATTCTTGATGAAGAAGGAATATTTACATCGAGCGACGAATTGGGTGGATTGAGTTACAGTGCATCGGACATGGGCTTTGGAATTCAGAGGCGGTTGACTTTGGACTATGATGGAAACTTAAGGTTGTACAGCTTTGACGAGCAGAATATGGTGTGGTCGATCACGTGCCAAATGATCATGAACCAATGCGATGTGCATGGGCTATGCGGTAAGAATGGAATATGCATTCACAGTTATTCCAGTTTCAAAACAGTATGCATGTGTCCGCCTGGATATGAAATGAGCGATGTTACGGACTGGAGAAGAGGCTGCCAGCCTAAATTCGATTCAAGTTTTGAAAACATGAAAAGAATAAAGTTTGTAAAGCTTCCATATGCCGATTTTTGGGGCTACGATCTTAATCACACTTCAACTATATCGTTGAAAGGGTGCAAACATTTGTGCAGACAAGATAAATTATGCAAGGCGGTAGAATATAAAGGAGTTGATTGTTACGCCAAGTATATTCTCTTTAATGGAAGGTCTACTCCGAGTAATCCAGGTGACATTTATTTGAAGTTGCCTAAAACAATTTTGAACTGGAAAGAAAGCACTGACCAAGTGCATGAGATTGACTGCAGTAAAAGCGAAGAGTACCACAACGTAACTGGTGCATCGGCTAATGTTTATGACAAGGGAACCACGAAATGGGTTTACTTTTATTGGTTTGTTGGGGCATTTGGTTTCACCGAGCTAATATTTTTCTCTGCTGGATGGTGGTTTGTATTTGGAAGGGATAGGAAACCTACGTTGCTAGAGGAAGGATACAAAATGATATCTAGCCAGTTCAGGAAATTCACGTACAAAGAACTTAGAAAAGCAACCGATGATTTTAAAGAAGAGTTGGGTAGAGGAGGTTCTGGAGCTGTATACAAAGGAATTCTGGAAGACAGTAGACTGGTAGCAGTGAAGAAATTAGAAGATGTTGTACAGGGAGAAGAAGAGTTTTGGGCAGAGGTAAGTGTAATTGGAAAGATATACCATATGAATCTTGTGAGAATGTGGGGTTTTTGCAGTGAGAGTTCGCGCAAACTTTTAGTTTACGAGTACATAGAAAATGGATCGTTGGATAAGCATCTCTTTGTTGATGACAGCAACAACTGTAGTAGCAAAAGTAGAACTAGTAGTTTGCTGTCATGGAATGTTAGATACAAAATAGCAGTTGGAGTTGCAAAGGCATTGACATACCTTCATCATGAGTGCCTTGAGTGGATAGTGCACTGCGATGTGAAACCCGAAAACATACTTCTGGATGGTGAGTTTGAGCCTAAAATAGCAGATTTTGGGTTGGTGAAGTTGTGCAAGAGAGGTGGAGTTGGATTAGATGTATCACAGATAAGAGGAACAAGAGGTTACATGGCACCAGAATGGACTTTGAATCTTCCAATAACTGCAAAAGCTGATGTTTACAGCTTTGGGGTGGTGTTACTAGAAATACTAATGGGCACCAGAGCATCAAGTGGCGATCTCACAAGTTTGGTTCAGGCTTTGAAAATTAAATCGCAGCAAGAAGGAAACTGGGTTGGAAAGTATGTTGATCCAAAACTGAACAGAGAATTCAACTCCAAACAAGCAATGCTAATGATGAAAGTTGTGGTTTCTTGTTTGGAAGAGGAAAGAACTAGGAGGCCCAACATGGATAACGTTACTCAAATGCTTGTGTCCGAATACTGA

Protein

Gene

>AfisC4G03373
ATTAATATGTTAAAATCATCTACCAACATGAAAAATTTAACTTCTCTTCTATATCTTATATATCTCATTCTATTCACGAAAATCTCAACATCTCAAATCAGTACGCTTTCAAAAGGATCATCTCTTTCGGTAGAAGACAATTCAAACCCATTTTTAGTCTCAACTAAAAACAGATTCAAATGTGGCTTCTATGAAATCGGCACCAATGCTTACATCTTCGCAATATGGTATTCAAAATCAAACAATACTATCGCATGGACCGCAAATCGCGATCAACCCGTAAATGGCCATGGTTCCAAAATCGAATTCCTAAAGGATGGTTATATGTCATTAAAAGATTACGATGGAAGTACAGTATGGAGCACCAATACAAGCTCAACTTCAGAAAAAGTGTCACTTTTGGATACAGGTAATCTTGTGATCACCGATTTCAGTGGTAAAATTATATGGCAAAGTTTTGACTTCCCAACTGATACCATTCTGCCTATGCAAACAATAACCAAAAATACAAAACTAACATCTGCCTCTACTAAAGGCTCGGTATCCTCTGGCTATTACAGTTTACTTTTTGACAATGACAATATATTGAAACTGATATACAATGGACCTGAGATTTCCAGCATCTACTGGCCTAACCCTGAAACCCAGGTGTTTCAGAATGGAAGAACTAATTACAACAGCAGCAGAATTGGAATTCTTGATGAAGAAGGAATATTTACATCGAGCGACGAATTGGGTGGATTGAGTTACAGTGCATCGGACATGGGCTTTGGAATTCAGAGGCGGTTGACTTTGGACTATGATGGAAACTTAAGGTTGTACAGCTTTGACGAGCAGAATATGGTGTGGTCGATCACGTGCCAAATGATCATGAACCAATGCGATGTGCATGGGCTATGCGGTAAGAATGGAATATGCATTCACAGTTATTCCAGTTTCAAAACAGTATGCATGTGTCCGCCTGGATATGAAATGAGCGATGTTACGGACTGGAGAAGAGGCTGCCAGCCTAAATTCGATTCAAGTTTTGAAAACATGAAAAGAATAAAGTTTGTAAAGCTTCCATATGCCGATTTTTGGGGCTACGATCTTAATCACACTTCAACTATATCGTTGAAAGGGTGCAAACATTTGTGCAGACAAGATAAATTATGCAAGGCGGTAGAATATAAAGGAGTTGATTGTTACGCCAAGTATATTCTCTTTAATGGAAGGTCTACTCCGAGTAATCCAGGTGACATTTATTTGAAGTTGCCTAAAACAATTTTGAACTGGAAAGAAAGCACTGACCAAGTGCATGAGATTGACTGCAGTAAAAGCGAAGAGTACCACAACGTAACTGGTGCATCGGCTAATGTTTATGACAAGGGAACCACGAAATGGGTTTACTTTTATTGGTTTGTTGGGGCATTTGGTTTCACCGAGCTAATATTTTTCTCTGCTGGATGGTGGTTTGTATTTGGAAGGGATAGGAAACCTACGTTGCTAGAGGAAGGATACAAAATGATATCTAGCCAGTTCAGGAAATTCACGTACAAAGAACTTAGAAAAGCAACCGATGATTTTAAAGAAGAGTTGGGTAGAGGAGGTTCTGGAGCTGTATACAAAGGAATTCTGGAAGACAGTAGACTGGTAGCAGTGAAGAAATTAGAAGATGTTGTACAGGGAGAAGAAGAGTTTTGGGCAGAGGTAAGTGTAATTGGAAAGATATACCATATGAATCTTGTGAGAATGTGGGGTTTTTGCAGTGAGAGTTCGCGCAAACTTTTAGTTTACGAGTACATAGAAAATGGATCGTTGGATAAGCATCTCTTTGTTGATGACAGCAACAACTGTAGTAGCAAAAGTAGAACTAGTAGTTTGCTGTCATGGAATGTTAGATACAAAATAGCAGTTGGAGTTGCAAAGGCATTGACATACCTTCATCATGAGTGCCTTGAGTGGATAGTGCACTGCGATGTGAAACCCGAAAACATACTTCTGGATGGTGAGTTTGAGCCTAAAATAGCAGATTTTGGGTTGGTGAAGTTGTGCAAGAGAGGTGGAGTTGGATTAGATGTATCACAGATAAGAGGAACAAGAGGTTACATGGCACCAGAATGGACTTTGAATCTTCCAATAACTGCAAAAGCTGATGTTTACAGCTTTGGGGTGGTGTTACTAGAAATACTAATGGGCACCAGAGCATCAAGTGGCGATCTCACAAGTTTGGTTCAGGCTTTGAAAATTAAATCGCAGCAAGAAGGAAACTGGGTTGGAAAGTATGTTGATCCAAAACTGAACAGAGAATTCAACTCCAAACAAGCAATGCTAATGATGAAAGTTGTGGTTTCTTGTTTGGAAGAGGAAAGAACTAGGAGGCCCAACATGGATAACGTTACTCAAATGCTTGTGTCCGAATACTGATATAAACAATATACGCAATATTGCCACAGATAATGTTAAAGAATAAATTTTGTTTCAAAGATAAAATAGAACGTTATACTTACATACCCCATGATGTCCACTTTTGACCGAGTACTTTGTCTTTCC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010920495.1	2.0e-252	putative receptor protein kinase ZmPK1
Swissprot	P17801.2	4.1e-194	Putative receptor protein kinase ZmPK1
trEMBL	A0A6I9R4V7	1.4e-252	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	33.62	1e-101	368		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G03373	AT2G19130.1	824	444	31	11	795	7	766	33.62	1e-101	368
AfisC4G03373	AT1G34300.1	752	423	24	67	795	60	756	33.38	1e-96	351
AfisC4G03373	AT4G00340.1	798	431	22	47	795	30	759	31.33	1e-86	318

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	80	174	91.5	2.8e-26
PF00954.17	S_locus_glycop	Domain	241	323	40.6	2.7e-10
PF00069.22	Pkinase	Domain	521	793	168.8	1.3e-49

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0005488	F	binding
GO:0009987	P	cellular process
GO:0016301	F	kinase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network