result

Gene information

Detail information of AfisC4G04103

Location

Gene	Chr	Start	End	Strand
AfisC4G04103	chr4	772477641	772480821	+

Sequences

CDS

Protein

Gene

>AfisC4G04103
CTAACTCACATTTATTCCCTATCTCATCAATTTATTTGTTATTTCCTTAGATATGGGATTAAGAGATGTGGAATCTGGGTTACCACCGGGCTTTAGATTTTTTCCTAGCGATGAAGAGTTAGTATGCCACTATCTTCATAAGAAAGTGGCCCGGTTAGCAATGAAAGAAGAAACTATGGTGGAAATAGATTTACATACATGCGAGCCATGGGAATTGCCTGGTGAGTAGTATCTATACAACTCTTATTTGTTAATGTTCATAATTTGCTATGCTATTTATCTACTTTGCATAGAATGAAGGCTGAGTGGTGTCGCTTAATATCTTTTTTTTCTTTCTTTTTTTCTTTTTTCTGTACATCTATGTCTTTGAAAGCAATCTTGACCTGTGCTTATATATAATCCTCCTTGAAATTGAATTGCCAAGGATCAATAAGATATTTGGAAATGGTATATAGTTCATCGGTGATATTGTGGAAGACTGTACTGAAATATTGTTCATAATCTGTCCAGATACATTGCTTGCAACTCTAAGTAATTTGGATTGCGTAATCTAGCTGTTAACATTCTCAATCGAATATGGTCCATGATGTAATACTAAAATTCCTTATATATAAGCTCTGGTTGATTGTCATCACCTATATAATATTCCAGTACTGTTTATTTCTGAAGTTACGGTTTGATTAGTCATCACCTATATAAGATACATTGTCATCACCATCCTCTCCCCTCTCCTTTCTTTTTTTAATAGATTTAAAAAAAAATATTTATTGGAAAAGATACTTCTGTTAATTACCAAATACAAAGGGTGTCTAATAATCAAATAGGTGATCAGTACGACAAACCAAAACTATACATAAATATTAGTATTAATATATTCAGACACCCGCTAAAGTGACTATTAAGCAGGAATGTAGATTGACTTCAATTCAAATTCCATACAACCTTTGTATTACATCCATTCAAACTGTAGTGTTCTTTAAAATCAAGATGAAATTCTTTATTTCCGTCATATTCTTAAGCAATGTCAAGATGTTAATAATGATGTATTTCAGTCTGAAATGTTTCTCTGACAAAATTTAAAAATAGCATGAATATTTAATTTTCAGAGGTGGCCAAGCTAAGCGTGAATGAGTGGTATTTCTTCAGTTTCAGAGACAGAAAGTATGCAACTGGATCGCGTACAAACCGTGCGACAAAATCTGGGTATTGGAAGGCAACAGGAAAAGATCGAACGATCTACAATCCATCAGCAAGGAATGAGATTATTGGGATGAGAAAGACATTGGTCTTCTATAGTGGAAGAGCTCCTAATGGGATCAAATCCAGTTGGGTCATGCATGAGTTTCGGTTAGAAAATTCTCATTCACTCCCTAAGGTATCATTTCCTTTTTATTTCACCACACCTCTCGTATTTTTGTGCCCGATAAGGTTGAAAATTCTCACACTTCCTAAAGTATCATCTTATAAAATACATAGAAACAAACAGATATTGATACAGTGTTTGATTAAGTAGTTGATTAATAAAATACAGTACTTTTAGTATATTTAATAATATATTGTTTTTGCTTTTGCAGTTCATATGATTGGCGTCATCATCTTTTTCTTCTTCTTTTTTTCTTTCTGGAATTGGTTAAAAGAAATGATTGTTAACTGAAATAATAGAACCATTCTACAGTCAGTTAACTACGTATAACTTATTAGTAGTCAAACTATTTAAGGATAATTTATTTCAATTTTAATATGTTTGGAAACTTCACATAAGTTGTTTGCAAAAGTAACTAACAGGCAGAGAGAAACAAATATTTGTTGACTTTCGAAACAATTTCATAAGCAATTTTGATCAAACATTTCCACTTGAAAGTCAAAGTACATCCAAGCATTCCCTTTAAAAGTTATATCTAAAACTACCTAAAAGTTGATATTCAAAACTCATTTAAAGGGGTTTCAAAGTAAGTTGTTGCCAAACGTGGTGTACATAATCTTTTTTGTAGCTCATGTTATTGTTTTTTCTTCATATAACATAATATTAAAAGTTTGATTTAAGTCCTGAGAGAGAGAGTTAAATTTTAGTTTGTACAGGATAAAATGAGAAAACAGAATAATGAATATATCGGCTAATGATATAGTTAGGTTACTATGATTTATAGTGATATTTATATTTGATTTTATGTTTTCAGTTATATGCCAATGATCTATCACTGATTAGTGACTGTTGAAAGGCAACCTTTATTGCTTAATGCATATCTCTATTTCTCTACTGTTAAGAATGAAAGTTCAGTCAATATGATTTCCACTGTGTCTTTTTGAATATTCGAAAATACCCTAAATAATATCCCATTTTCGATAACTCGTCAACGGTATACGCTACAAATATGTAGCATCCACCACCATCCCCTTCATGATCATTCATCAACAGAATTTCACTATCGATTTGTAACATCCACCACTATCAAGACTGCTTGAAATAAGGACGTCTGTGACCATCAAAGGTTTTTCACTTGTGACACACATAATAAAACCAACGTTATTGTAATAAAATTGTTTTCCTGCATTAAATATTTCTTAAATAAAAAGTAAACATCTGTATTTATTGGACGTACACGGATGCGTGCATACTATATTACTTAATTAATCTCAATGCATACAATGTAGTTTCTTTAAAAATGGCAGGAAGATTGGGTACTCTGTAGAGTATTCAACAAAAGAAAGGAGGAAGAGGGGTCGGCAATCACGAGTTCATCATCGTCTCCATTATTGTCAAGGGACTGCCCTTTGGAAGGACGAATGTATAAGCATATTGGACCTTTGCTCTCTGGTGATGATCATGACAACAGTTATTTGTGTCCTACATATGAAAGCATAGACGATTTCAACGATATGTCCAATTTGATGTCTTTCAATGTTCCTCAAGCTGAGATAGAAGATTTTGGATTTCTTATGGACGTGGGCCTATAACAAGCGAGGTTCAGGCGATAAGCTTTGGTAGCAGTATTGGCTGTAGCTTGTGAATCAATGATTGAAGTGTGGCTGTGTAAATAGTTAATTTTATTAGTTAAGTGTGGCTGTGTAAGCAATTCTGTTATTTACCAGTTTTATAGGGTAGTGTGTGCTCATTTGGTTTTACTTTGTATCACTGTGTTTGTGTGCCTAATTTTGTTCCATTTACGAAATTTGAATGAAC

Functional annotation

Database	accession number	e-value	annotation
nr	ARV85584.1	1.5e-78	NAC protein
Swissprot	Q9S851.1	3.1e-52	NAC domain-containing protein CUC3
trEMBL	A0A218L3K9	1.1e-78	NAC protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G28530.1	65.91	1e-63	239	anac074;NAC074	NAC domain containing protein 74

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G04103	AT4G28530.1	176	43	3	1	160	1	175	65.91	1e-63	239
AfisC4G04103	AT1G76420.1	171	73	2	7	174	19	188	54.97	6e-53	203
AfisC4G04103	AT1G56010.2	163	58	3	6	160	15	174	57.67	2e-51	198

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	11	138	94.9	3.6e-27

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0009531	C	secondary cell wall
GO:0009651	P	response to salt stress
GO:0009723	P	response to ethylene
GO:0009735	P	response to cytokinin
GO:0009737	P	response to abscisic acid
GO:0009741	P	response to brassinosteroid
GO:0010029	P	regulation of seed germination
GO:0010072	P	primary shoot apical meristem specification
GO:0010199	P	organ boundary specification between lateral organs and the meristem
GO:0010200	P	response to chitin
GO:0010223	P	secondary shoot formation
GO:0044212	F	transcription regulatory region DNA binding
GO:0010981	P	regulation of cell wall macromolecule metabolic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0042542	P	response to hydrogen peroxide
GO:0042803	F	protein homodimerization activity
GO:0043068	P	positive regulation of programmed cell death
GO:0043565	F	sequence-specific DNA binding
GO:0045491	P	xylan metabolic process
GO:0046982	F	protein heterodimerization activity
GO:0048467	P	gynoecium development
GO:0048527	P	lateral root development
GO:0048759	P	xylem vessel member cell differentiation
GO:0048829	P	root cap development
GO:0051091	P	positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051782	P	negative regulation of cell division
GO:0071365	P	cellular response to auxin stimulus
GO:0090058	P	metaxylem development
GO:0090059	P	protoxylem development
GO:0090400	P	stress-induced premature senescence
GO:1900057	P	positive regulation of leaf senescence
GO:1901348	P	positive regulation of secondary cell wall biogenesis
GO:1902074	P	response to salt
GO:1903648	P	positive regulation of chlorophyll catabolic process
GO:1904250	P	positive regulation of age-related resistance
GO:1990110	P	callus formation
GO:0090709

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network