result

Gene information

Detail information of AfisC4G04780

Location

Gene	Chr	Start	End	Strand
AfisC4G04780	chr4	903349981	903351170	+

Sequences

CDS

Protein

Gene

>AfisC4G04780
TAAAGTAGTAAATACGGGACACAAAAATTAAGCGATGAGAATCAAAATATTTCTAGAAAAATGAAACGGTGGGATTAAAAAAGAAAAGTGGGGAGGTGGTAGAAGAAAGAAGCAATCAACTCGTTTGTGGGAAAGAGAGACCCATTATAATTACAACCTCATCCCTCATCTCTTCAAATTCAACTCCTCAACACAACAAATCCATCAAATAACCCATCAACAACTCCATCTCTTATCCGGATCCTCACCCGCCATGCGTAAATCCCGCGGATCTGTTCCACAACCTCAGATCGACGCCGGATCCCAACTCGAAATCCGCTTCCGAGGCGTCCGCAAGCGCCCTTGGGGCCGATTCGCCGCCGAGATCCGCGATCCTTTCAAGAAAGCACGCGTCTGGCTCGGCACCTTCGACTCCGCCGAGGCCGCCGCCCGCGCTTACGACGCTGCTGCCATTCGCCTCCGCGGAGCCAAGGCCAAAACCAATTTCCCGCCAAATCTGCCACAAACAAGGCCGATCCTCCCGGCGGCGGCGGCGATCTGTTACCCGGCGTCGAGCAGCCTCAGCTCCACGGTGGAGTCGTTCAGCGGGCCTAGGCTGGTCTCGGCAACGCGGGTGCAGCACGTGCAGCTGCCACGTGACCTCGATGACTGCCGCAGCGATTGCGGATCGTCGTCCTCGGTCGTGGATGCGGACTACGCTGACGTGGCGTCCGTGCATACTGACAGAGGTCGTTGCTTTCCGTTACCGTTTGATTTGAACGAGATGCCGATGGATGAGGATGTGCAAAATACTGCTTTGATGCTGCGATTATGAGGAAGAGTAAAGAAGAAATTATGATGAGTTTTTTAATCTTTGGTTTCTTTCTTCCCTGAAAAAAAAAATGATTTAGTGTTGTTCATGGTTGTTGTTATCGTTGATTATGACTTAAAAAATAGAATTGATCGGATGTTGTATGTTTTGATATATTGATTTTAATTACGTGTATTGATCTATCCAATTCAGTGACATGAATTGAGAAAGAAATCAAACTATTCAAATTTTTAGTGGTGGAAATATTTGGTCAGCTGCTTGATTTTGATCTAGTAGTTCGGCTGAACAATGTTGTTTGGCATTTAGTTAAGCATCTGTTCACAATTTGGTGAGATGTGAATCAGTAGACATGCTAGAACATTTTCTTCCTTTGCTATTT

Functional annotation

Database	accession number	e-value	annotation
nr	KAF3326034.1	3.1e-39	ethylene-responsive transcription factor 3-like protein
Swissprot	Q9SXS8.1	8.5e-34	NtERF5
trEMBL	A0A833QN07	2.2e-39	Ethylene-responsive transcription factor 3-like protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G50640.1	76.19	2e-27	118	ATERF3;ERF3	ethylene responsive element binding factor 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G04780	AT1G50640.1	84	15	2	1	79	1	84	76.19	2e-27	118
AfisC4G04780	AT3G20310.1	94	29	1	1	90	1	94	64.89	2e-25	112
AfisC4G04780	AT3G15210.1	97	32	1	20	116	22	114	62.89	2e-25	112

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	22	71	49.5	3.4e-13

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0001944	P	vasculature development
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0006970	P	response to osmotic stress
GO:0009414	P	response to water deprivation
GO:0009749	P	response to glucose
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0009864	P	induced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010105	P	negative regulation of ethylene-activated signaling pathway
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0016604	C	nuclear body
GO:0019760	P	glucosinolate metabolic process
GO:0034059	P	response to anoxia
GO:0043565	F	sequence-specific DNA binding
GO:0051301	P	cell division
GO:0070483	P	detection of hypoxia
GO:0071456	P	cellular response to hypoxia

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network