result

Gene information

Detail information of AfisC4G04968

Location

Gene	Chr	Start	End	Strand
AfisC4G04968	chr4	928966222	928968991	-

Sequences

CDS

>AfisC4G04968
ATGTCATTTTTGACCTCGACATTCGGTACCAATACAGCACTGTCGAAACCAACATCCATATTTGGCCTAAAATTGTGGGTCATCATCGGGATCTTGATCGGTACCGCCATTGTCCTCTTCCTCTTCTTCTTCTCCCTCTGCATCTCCTCCCTCCGCCGCATCCGCCGCCGCCACCATCTCTCGTCCACTCTCCCTCCTCTTCCTCCCCAACCTTCTCGTAAACCATTGAAGCTGCTTTTGCATGACTGTACCCCACAAATATCAAAGGAAATACTCCCCATCTCTCCTAAAGTAGTTGTTAGCTGTAACGAAAAACAGCAGTACAAGCTTCCACTTCCTGCATTACCATGTCCGAGATCGGATAAAAATACAAGTGGATCGGGTAGTGGCGGCAGCAGAGGCTCCCCACCGCCGCGGAAGGGGATGCCTGAAGTGTCACATTTGGGATGGGGGCACTGGTATACATTAAGAGAGCTTGAATTGGCAACCGACAAATTTGCTGCTGAGAATGTGATTGGTGAAGGTGGTTATGGGATTGTTTATCGAGGGATTTTGAGTGATAACAGTGTCGTTGCTGTAAAGAATCTTCTGAACAACAGAGGACAAGCCGAGAGAGAATTCAAAGTGGAGGTCGGAGCAATAGGGAGAGTTAGGCATAAGAATTTGATTAGATTGCTTGGTTATTGCGTTGAAGGAGCTCATAGAATGCTTGTTTATGAATATGCTGATAATGGAAACTTGGATCAATGGCTTCATGGAGATGTAGGTGAAGTAAGCCCATTGACGTGGGATATTAGGATGAACATACTAATCAGTGCTGCTAAAGGACTATCATATCTACACGAAGGCCTTGAACCAAAGGTTGTTCATCGAGATGTTAAATCAAGCAACATCTTACTGGACAGACAATGGAATGCTAAAGTATCAGATTTTGGTTTGGCAAAGCTTATAGGTTCAGAGAGAACATATGTCACAACTCGAGTCATGGGAACATTCGGCTATGTAGCTCCTGAATATGCTAGTACAGGAATGTTGAATGAGAGGAGCGATGTCTATAGCTTTGGAGTACTAATCATGGAGATTATATCTGGTCGAACACCTGTAGACTACACAAAACCCCCTGGAGAGGTAAATTTGGTAGAATGGTTAAAAACTATGGTTGGAGAAAGAAAATCGGAGCAAGTAGTTGATCCGAAGATGAAAGAGAAGCCTTCATCAAAGGCGCTAAAGCGAGCATTACTCGTAGCTCTTCGATGTATAGACCCCGAAGCACAAAAAAGACCCAAAATGGGACATGTCATCCACATGCTTGAAGTTGATGACACTATTTTCTCTGAGGGGCGCAAGGAAACAGTGGGTAAATCAGATGGGTACAATCAGGTGGAAGAAGGTTGTTTTCCAACAAGTAGACATCAAACTGGGTTTAGATGA

Protein

Gene

>AfisC4G04968
TTCCTCCTCCCAAAAAAACAATTAAAATGTCATTTTTGACCTCGACATTCGGTACCAATACAGCACTGTCGAAACCAACATCCATATTTGGCCTAAAATTGTGGGTCATCATCGGGATCTTGATCGGTACCGCCATTGTCCTCTTCCTCTTCTTCTTCTCCCTCTGCATCTCCTCCCTCCGCCGCATCCGCCGCCGCCACCATCTCTCGTCCACTCTCCCTCCTCTTCCTCCCCAACCTTCTCGTAAACCATTGAAGCTGCTTTTGCATGACTGTACCCCACAAATATCAAAGGAAATACTCCCCATCTCTCCTAAAGTAGTTGTTAGCTGTAACGAAAAACAGCAGTACAAGCTTCCACTTCCTGCATTACCATGTCCGAGATCGGATAAAAATACAAGTGGATCGGGTAGTGGCGGCAGCAGAGGCTCCCCACCGCCGCGGAAGGGGATGCCTGAAGTGTCACATTTGGGATGGGGGCACTGGTAAAACTATTTATTTCATAGATCGATTTATTAGATTCAGAAAAGGTTTTTTTTGTGCAGATTCGTGCAAATTTAAGTTCAAGTAGATTTAGAATCATACATTGATAAAGATTTTTCAGGTATACATTAAGAGAGCTTGAATTGGCAACCGACAAATTTGCTGCTGAGAATGTGATTGGTGAAGGTGGTTATGGGATTGTTTATCGAGGGATTTTGAGTGATAACAGTGTCGTTGCTGTAAAGAATCTTCTGAACAACAGGTTTAATTCGAACTGAATTGCTCATTTGTGCTTTTGAGGAAATTATTCTTATAAAACTGTTCGTTTTTTGGTCAGAGGACAAGCCGAGAGAGAATTCAAAGTGGAGGTCGGAGCAATAGGGAGAGTTAGGCATAAGAATTTGATTAGATTGCTTGGTTATTGCGTTGAAGGAGCTCATAGGTGATTCAGTATTTTCTTAATCACTCAGTTATTTGGGTCTAAAATACATAAAAGTTGTTCATAACTTACTAACATTGTTTTGGTGCTTTTGGTTAGAATGCTTGTTTATGAATATGCTGATAATGGAAACTTGGATCAATGGCTTCATGGAGATGTAGGTGAAGTAAGCCCATTGACGTGGGATATTAGGATGAACATACTAATCAGTGCTGCTAAAGGGTATTTGTCAACCATGATAATTACCTGGAATGTATTAGGGTCTTAGTGTTCATGTACATTGAATAATTAACATGTTGATTTGGTTACAGACTATCATATCTACACGAAGGCCTTGAACCAAAGGTTGTTCATCGAGATGTTAAATCAAGCAACATCTTACTGGACAGACAATGGAATGCTAAAGTATCAGATTTTGGTTTGGCAAAGCTTATAGGTTCAGAGAGAACATATGTCACAACTCGAGTCATGGGAACATTCGGGTATATTCTGCGTTTTTGAAACATCCCATATCGTATTTTTCTCACTAGATCAATATTTGTTTGATCACCGTCCGCTTATGATACATAATATGATAATCTTTCTTTTTCCCTTCATTGTAGCTATGTAGCTCCTGAATATGCTAGTACAGGAATGTTGAATGAGAGGAGCGATGTCTATAGCTTTGGAGTACTAATCATGGAGATTATATCTGGTCGAACACCTGTAGACTACACAAAACCCCCTGGAGAGGTTTCTCCCTTTGATTTAAACCTTTTTTGATGATTTGTTAGTACTCAATCAACTGGGCACTGTATGTAAATTAGAAAGTGTTACATATGAGCTATGTCGTGGTTGATGATTGATGTTTGTTAACATGTTATACTTAAAAAACATTGTATAGGTAAATTTGGTAGAATGGTTAAAAACTATGGTTGGAGAAAGAAAATCGGAGCAAGTAGTTGATCCGAAGATGAAAGAGAAGCCTTCATCAAAGGCGCTAAAGCGAGCATTACTCGTAGCTCTTCGATGTATAGACCCCGAAGCACAAAAAAGACCCAAAATGGGACATGTCATCCACATGCTTGAAGTTGATGACACTATTTTCTCTGAGGTATTTATGTAGTTATTGCTTTTAAAGGGTCTTACATTAAAAGGTATATACACACATTGATAATTTATGCATGCTTATAAATGGCAGGGGCGCAAGGAAACAGTGGGTAAATCAGATGGGTACAATCAGGTGGAAGAAGGTTGTTTTCCAACAAGTAGACATCAAACTGGGTTTAGATGAATGAATTACATTGAAAAAAAAAAGGTTATTACCAAATTTTGGCGTTCTTCTTTTAGTGGGTCACCTTGCAGTAATCATAATGCTTGGAACTGACGTACCTTTTTTTTTTTGTTGTTGTTGTATTGTACTATACAGCTAGATAAGCATTGTAAATGGAATGATATATCCATAGGAATTTATTCCCAGATCTTGTCTTCACATGTGTAAATGTTAAATTAAGATGTGTTTATTCAGCGCCTTGCTGATAAGATATTCGTTTGCCTTATGGGCTCATTAAAACCATAATAAGAGCACCGATCATGTAAAGAAGATCTAAGGCATGGGTGATAACATATAATTTCGTTTATAACAAAAGCTCTCATATGAATCGTTCTTTTTGAGTGATTTATAAAGGGTTGGAGAAGCTTTGTGGTGTGGTTGATTCAACAAGCTTTGGCTGATCCAGCATGTTATTTTGTTGCAATCAAAAAAATCTAAGTACTTGATATCAAATCCTTTTTTTAAGGACTGTATACGAAGAAGACAGCAAGTACGGGGTTTCTCATTCAGACCTTGGGCTAAAATATTATTTACCCA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008805559.2	6.7e-171	probable serine/threonine-protein kinase At1g01540
Swissprot	Q3EDL4.2	1.1e-162	Probable serine/threonine-protein kinase At1g01540
trEMBL	A0A8K0N4G1	7.2e-175	Putative serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G01540.2	62.50	1e-170	596		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G04968	AT1G01540.2	480	154	5	1	474	1	460	62.50	1e-170	596
AfisC4G04968	AT4G01330.1	444	144	4	11	451	12	447	65.09	2e-168	588
AfisC4G04968	AT4G01330.2	455	150	5	11	460	12	458	64.18	2e-167	585

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	169	437	157.7	2.9e-46

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0006950	P	response to stress
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma
GO:0009941	C	chloroplast envelope
GO:0019901	F	protein kinase binding
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network