result

Gene information

Detail information of AfisC4G05171

Location

Gene	Chr	Start	End	Strand
AfisC4G05171	chr4	957832656	957834603	-

Sequences

CDS

Protein

Gene

>AfisC4G05171
ATGGCTAAGGATGTCAACAGAACTCTTCATACTATAGCTCAGGAACAGGTACCTAACATTTTATTTTTCTTGATTTATATGCTTGTTATCGCTAAAACTTTGTTAGAAAAAGAAGAAAACAAGTTGAAAATAGTTTTTCAATTTACCTACTAGTGTCGACCACTCCAAGGGTTCAAGGGTTCAATGCTGGAAATGATGGAGCTGGATCTTCTGAAAAACGTGTTAATGTTGATGATTATGTTTCACATTTGCTTAATCTCGATGCCAATGCAGAGCATGAAGGGATGAATACCTGACAAGTAATGGCAGTGTTTAATTTTCAATGCAGACATTTCATCATATGATGTAGGTTGCCGTGGTTATGTTTTAAATTTTTAATGTAGTTGATGACTGAAATATTGTTTGCAAAAGTATTTTTAATAGGTCTATCAGTTTACAATTTGATGAATAATTTCTGAGGTTATTTTAACATTTTGATATTAGTACGTTGAGTTTCTTTTTACCTACTATTGTCGACCACTCCTGTGTTAAACTTGAATTTCATCAGGGATCATCAGATTGCTCGAAGGCAGAAAGCATGGTTAAGAGTCTACAAATGGAGGGAAGATATCTGCGCCATATTCGGTAATTGCTGAATTATTTGAAATATGATTGTAGTGCATACAGAAGTAGGTTGATAACTAGTTCCTTAGCTTCCTAAAAAATGTTACCTGCCACCAAGCAAAGTCCGTGCTTCTTTCATGGGAACAATGAATGCAAGTCTCCTTAGTTTACCATTGTTAAATAAAATGGAATACTGCAGCAGCAGTAGCTGAACCTAATATCTATTATACTCCATTCTCTTCCTCCTATTACCAATAGAACTCTACTTTCTCAGTGATATTAGTTAAGTGGGGTGTTATTACCACTCCCTGATGTTTTATTTAAATGTTCCTCATGATGTTCCACTTCCTATGTATTTCCTAAAACTGATTTTCTAGCTACGATATGAATATATACCATTTTTATCCGAGTTCAACCCCAAATGAGATGCAATGATTAATATCTATTATGTTATCATTTTGTGTCCTAATAGTATGTGTGTGCATCTGCACACACATAAAATTAATTATTTAATTAATTAGTTTCCATCTAACAAGAATTTGTCTTTTCAAAGTAGTGGAAACAGACCAAAAATGGAATCAGCTCAAAATGCTGAGGTTAGTATGCTTCTGCAGTAGTGTTTTGTTGTCCACTTTTCTTTTCATACTTAATTGACACAGTGTATGCTGAATTTTCATTATTAGGAACTCCAAAATTCTCATCGATGGAGCCCAACATCAACTATCTCTTTGAAATGCATCTTTGTTCGTCAATTGTGCGGTCTGAGTTTTGTTGAATGAAACTGCTTCCAAACTGAGCAGTACTCGATTCTTCAACAAAGCCACTGATGTTAAAAAGCTCAATATACACGGTCTTTCTTTCCTTGAGCTCCTCTTGAAGTATTGAATGAACACCCGTAACTACGTTCTTCAACAAAGCCACTGATGTCATCACCGCCAAACACTTCCATGACAACCGATGCTATGCCGCCACGTCATCCCAGCCACAGTGGAAGTGGATCGAGAACTACTGCTGCGCCAACGGCTGCCTCCGCTCCCAGAACCAGTGCAAGAACAAATGGAACAACCTCCTCCGCGAGTACATAAAGGTCTGCGACTACGAGTCCAGAAACGCTGCAGCCGAACCTGGTACTGGTGCCAACCGGAAAAGCTACTGGGAGATGGAGCGGCGTGAAAGGAAAGAATTCAACCTGCCTACCAACATGGGCTTCAACATCCACGAATCGCTCGCTGATGTACTCAATCTCCGCAACGCTCGCCTGATCCCCGTCTCCTCGACACCGGTCATGATGATCCCACCACAGCAGCCGCAAAAAGACCTCTCGCCCCCTCCAGCGGTGACGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	RRT60931.1	6.6e-26	hypothetical protein B296_00019704, partial
trEMBL	A0A426ZAD1	4.8e-26	Myb-like domain-containing protein (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G35640.1	39.83	7e-20	93.6		Homeodomain-like superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G05171	AT2G35640.1	118	61	2	43	151	27	143	39.83	7e-20	93.6
AfisC4G05171	AT1G31310.1	94	43	1	66	150	63	156	44.68	1e-19	92.8
AfisC4G05171	AT4G31270.1	126	77	3	57	182	38	152	30.16	3e-09	58.5

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13837.3	Myb_DNA-bind_4	Domain	52	108	35.1	1.2e-08

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network