result

Gene information

Detail information of AfisC4G06587

Location

Gene	Chr	Start	End	Strand
AfisC4G06587	chr4	1229576326	1229578036	+

Sequences

CDS

>AfisC4G06587
ATGGCTACTATTTCATTCAATAGCCTTCTATTATCCTACCCAGAAGTCTTATTAGCAACAGTTTCCTTCCTATTCATATATTGTTATTGCCAATCAGTTAAAAAATCAGTTATTCCAGTTAACTGGCCGGTAGTGGGCATGCTACCGGGTCTTTTGATCAACCTTACCCGCTTCCATAATTGGGTTACCGACCTCCTCCACGAGTCCAACTACACGTTCAAATTTAAAGGCCCGTGCTTCATGGGCCTTGACTTCTGGCTAACTTGCAATCCAGCCAACGTCAACCATGTTTTCAATGCAAACTTCCCAAACTACCCCAAAGGCGATGAGTTTCTCGAGATTTTCGATATCCTGGGCGATGGCATATTCAACGCCAACGCCGAGTCATGGAAGGCTCAAAGAAAGAAAGCCCACGTCGTGATCACAAACCCTAGTTTTCGAACCTTTCTCGCAAGATGCACCAAGGAGAAAGTGGATGATGTGTTGGTCCCACTTTTGAAAAAGTTTGCGGACAAAAATGTCGTGTTCAACTTGCAAGACGTGTTTCTACGTCTGACATTCGACATGACGTGCAACCTAGTGTTTGGGGTTGACCCGGGGTGTTTATCTGAAGGATTACCAAACATTCCGTTCGCCAACGCGATGGACGGCGCGATGGAAGCAATATTCTATCGCCACATACTCCCACCGCCCTGGTGGAAGCTATTGCGGTGGTTAGACTTTGGAACTGAAAGGAGGTTGAAGACAGCGTGCGGTGTCATAGATGATTTCGTAGCCGATAACATCGCACGTAAGCGGGAAAAAAGATTTCACATGAGGGAAAACGGATTTCAGGACGAAGACCTGTTGAGTTCTTACATCAATGATTCCTCGGATATAAAAGATGATAAGTTTCTTAAGGACACAACCGTGAATCTCATGCTCGCCGGCAGGGACACAACAGGGGTCGCGCTCAGTTGGTTTTTTTGGCTAGTAACGAACCATCCGACGGTGAAGTTGAAGATCAGGGAAGAAATCGAAGAAGGGGAAGACAACGTCTACCTGCACGCGGCGATATGCGAGAGTCTGAGGTTGTTTCCATCACTGCCTTTCGAGCACAAAGCGCCGTTGCAGACGGAGAATCTACCATCCGGCGAAGAGGTTCGACGAGGAGATAAAATCTTCTTCTCAACATATTCGATGGGACGGATGGAGGGGGTGTGGGGGGAGGATTGCTTGGAGTTTAGGCCGGAGCGGTGGATATCGGAGGGAGGGAGGGTAAAGCATGAGCCGTCGTACAAGTTTTTGTCGTTCAACTGTGGACCGAGGACATGCTTGGGGAAGGAGATTGCGTTTACGCAGATGAAGTGTGTGATTGCTAGAGTTTTGAAGGAGTTTGATGTGGAGTTGGTGGATGAGCATGTTGTTGAGCCTAAGCTTTCCATAATATTGCATATGAGGAATGGGTTGTTGGTGAGGGTTGAGAGAAGAGAGAGCAAACTGAAATGTTGA

Protein

Gene

>AfisC4G06587
AATGGCTACTATTTCATTCAATAGCCTTCTATTATCCTACCCAGAAGTCTTATTAGCAACAGTTTCCTTCCTATTCATATATTGTTATTGCCAATCAGTTAAAAAATCAGTTATTCCAGTTAACTGGCCGGTAGTGGGCATGCTACCGGGTCTTTTGATCAACCTTACCCGCTTCCATAATTGGGTTACCGACCTCCTCCACGAGTCCAACTACACGTTCAAATTTAAAGGCCCGTGCTTCATGGGCCTTGACTTCTGGCTAACTTGCAATCCAGCCAACGTCAACCATGTTTTCAATGCAAACTTCCCAAACTACCCCAAAGGCGATGAGTTTCTCGAGATTTTCGATATCCTGGGCGATGGCATATTCAACGCCAACGCCGAGTCATGGAAGGCTCAAAGAAAGAAAGCCCACGTCGTGATCACAAACCCTAGTTTTCGAACCTTTCTCGCAAGATGCACCAAGGAGAAAGTGGATGATGTGTTGGTCCCACTTTTGAAAAAGTTTGCGGACAAAAATGTCGTGTTCAACTTGCAAGACGTGTTTCTACGTCTGACATTCGACATGACGTGCAACCTAGTGTTTGGGGTTGACCCGGGGTGTTTATCTGAAGGATTACCAAACATTCCGTTCGCCAACGCGATGGACGGCGCGATGGAAGCAATATTCTATCGCCACATACTCCCACCGCCCTGGTGGAAGCTATTGCGGTGGTTAGACTTTGGAACTGAAAGGAGGTTGAAGACAGCGTGCGGTGTCATAGATGATTTCGTAGCCGATAACATCGCACGTAAGCGGGAAAAAAGATTTCACATGAGGTTGAAATCGATGTTTCGATCGTCAATTTCTTATATGACGTTTAAATTTTTTTTACAATCACAATTCATCTCATATAACATTTATACAATTTTGTTTACACAGGGAAAACGGATTTCAGGACGAAGACCTGTTGAGTTCTTACATCAATGATTCCTCGGATATAAAAGATGATAAGTTTCTTAAGGACACAACCGTGAATCTCATGCTCGCCGGCAGGGACACAACAGGGGTCGCGCTCAGTTGGTTTTTTTGGCTAGTAACGAACCATCCGACGGTGAAGTTGAAGATCAGGGAAGAAATCGAAGAAGGGGAAGACAACGTCTACCTGCACGCGGCGATATGCGAGAGTCTGAGGTTGTTTCCATCACTGCCTTTCGAGCACAAAGCGCCGTTGCAGACGGAGAATCTACCATCCGGCGAAGAGGTTCGACGAGGAGATAAAATCTTCTTCTCAACATATTCGATGGGACGGATGGAGGGGGTGTGGGGGGAGGATTGCTTGGAGTTTAGGCCGGAGCGGTGGATATCGGAGGGAGGGAGGGTAAAGCATGAGCCGTCGTACAAGTTTTTGTCGTTCAACTGTGGACCGAGGACATGCTTGGGGAAGGAGATTGCGTTTACGCAGATGAAGTGTGTGATTGCTAGAGTTTTGAAGGAGTTTGATGTGGAGTTGGTGGATGAGCATGTTGTTGAGCCTAAGCTTTCCATAATATTGCATATGAGGAATGGGTTGTTGGTGAGGGTTGAGAGAAGAGAGAGCAAACTGAAATGTTGAACTTATTGTGATGTTTTTAGTGTATGGCATGTAGCCTACGTTGAATCAAACATATGTATGTTTATTTGCAGAAGAGAAGTACCTTTCCCGCTACTATGTACTATTAATGTTTATTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020259904.1	2.9e-185	alkane hydroxylase MAH1-like
Swissprot	A0A140IL90.1	1.0e-118	Cytochrome P450 96T1
trEMBL	A0A5P1F304	2.1e-185	Cytochrome P450

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G23180.1	47.28	4e-136	481	CYP96A1	cytochrome P450, family 96, subfamily A, polypeptide 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G06587	AT2G23180.1	514	242	4	10	494	3	516	47.28	4e-136	481
AfisC4G06587	AT4G39490.1	515	250	5	9	490	2	516	45.05	2e-130	462
AfisC4G06587	AT2G21910.1	499	249	5	15	490	8	506	45.49	5e-125	444

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	80	474	174.7	2.5e-51

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0006952	P	defense response
GO:0005783	C	endoplasmic reticulum
GO:0055114	P	oxidation-reduction process
GO:0010025	P	wax biosynthetic process
GO:0010345	P	suberin biosynthetic process
GO:0016709	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0018685	F	alkane 1-monooxygenase activity
GO:0035336	P	long-chain fatty-acyl-CoA metabolic process
GO:0042761	P	very long-chain fatty acid biosynthetic process
GO:0048437	P	floral organ development
GO:0048438	P	floral whorl development
GO:0048827	P	phyllome development
GO:0080133	F	midchain alkane hydroxylase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network