result

Gene information

Detail information of AfisC4G07082

Location

Gene	Chr	Start	End	Strand
AfisC4G07082	chr4	1333004984	1333007959	+

Sequences

CDS

>AfisC4G07082
ATGATGACAACTCCTAAAATATGTTCCGGTGTAAATGAATCAGTAACCTCTACTGCAAACCTAGCTTCAAAAGAAACCAATACAAATTCTACATTAGATTTATCCCAAATTTTAGTTGAAGTTGTTCCGAATGCCGAGTCCAACGTCGCTCAAACTTCAACAAACGATGAAATAAACAACTCACCAAATTTGTTTCAAAAATTAGATGATATCAATGTATCAGATACTCCAGAATCTTTGGATGGGTCAAAGGTTGATCCTGAAGTTGGCATGTTGTTTAACTCAGAAGAGCAAGCATTCAAATTCTACAACTCATATGCTAAAAGAAAGGGCTTCAGTGTAAGAAAAGGTCATCTCTCTAGAAGGAAAGATGGGACCATTAGAGATAGACATTACTTGTGTAGCAATGAAGGTACACGTAAAGAGCATCGAACTCACGTTACCAAGAAACCACGTGCACTTGAGAGAACTAACTGCTTGGCTCGTATAGAATTCAAAGTGAACCGTGATAACGTTTGGGTTATTAACAAGTTTCTTGATGATCATAATCACCCTCTTGCAAGCCCGAATAAAATACACATGTTAAGGTCACATAGAACAAAATTACCTGCTCAGCATGCTTTCATTACTGAAATGGATTATATTGGAGCGAAACCAACTCAAGTTTACGAGTCCCATAGAGAAAGTGCGCATAGTGATGAGAATTCTGGGTTCATATCTAAGAACCAAAGCTACAACTTGTTGGGTACGAATAGAATGAAAGATTTAGAGAAAGGAGATTCACAATTTTTCCTGGATTTTTTCAAAGCAAAACAAATGGAGGATCCTTCATTTTTCTATGCAGTGCAAGTCGATGAAAATGATAGAGTAACTAATTATTTTTGGGCAGATGCAAGATCAATACTTGATTATACATGTTTTGGTGATGCTCTTTTGCTCGATACAACGTATAGAGCAAGTAGATATGACATTCCATTCGCACCATTTATAGGCGTAAACCATCATAAGCAAATGGTTATATTTGGTGCTGCTTTGTTACTAGATGAATCTACAGAATCATTTGCATGGTTGTTCAAAACTTTTTTGGCTGCTATGAATGGAAGACAACCAAGAACGATATTAACAGATATTTCAGATTCATTATCTAGAGCTATCAGCATGACATTACCCGGAACTTATCATCAACATTGCATATGGCATATCATTCTGAATGCACCAAAAATTCTACCTCATGTTTATGGTCATGAGTCAAATTTTCAAAAAGAGTTTGAAAGCTGGATTTTTGAAAGTCGATGCGAAGAAGATATACAAAATGGACGGGAAAATTTATACACTAAATATAACCTAACGGGTAATTCGTGGTTCGAACAATTGTATTCAAGTAGAGAAAAATGGTCTTCAATTTATTCTAAAAATCCATTTTGCGCCAGCATGACAACGAAGCAATGGTGCGAGACAGTGGGAAACCAAATAAAGATGCTATTTTACAGAAAACTCCCTCCTTCGAAATTCATGCCACAATACCACAAAGCACTTGCTCAACTTCGTGAGAAAGAATCATCAGCAGATTACGAATCTCGAAAACTAAAACCTGTTCTAGTAGCGGATGTGCCAATGCTGATAGAAGCTTCTGAATCATATACACGAACAGTGTACAAAGAATTCGAAGTCGAATATAAAAGCCAACTAGCTTGCCTTTGCGAACCGGTCGAGATGAAAGGTACAATTTGCACTTTTAGGGTTTCGTATCCTCAAAAAAGAAGTTACGGGCTTGTTGAGTACGATACATCTAACGCTTTGGTAACGTGTAGTTGCAAGAAATTCGAAACTATGGGTGTGTTTTGCATGCATGCTTTGAAAGTTTTGAACTACAACAACATTTTGCACCTTCCACCGTGTTATGTGTTGAAGAGGTGGACGAAATTTGCGAAAGATGGGGTGGAATCTGCAAATAGTTATGATGGCGATGCACTGGGTTTGAAGTACGGTCAGGTTTGTCGTAAAGCTATGATGGTGGCTGTGAAAACTGCATTTTCAAAGGATGGGCTTGAGGTTTTGGAGCGTAGGATCGATAGGTTTATGGATCGGATGGTGTATGAAATGCATAATGATGGTTCGAGTAAGCAGATTGATGATATAAATATTGTTGATAGTATGCAGCAGAATGATTTGGAAGCTGCTAACATTTGCTTTGATGGGTTTTAA

Protein

Gene

>AfisC4G07082
AAAACAGAAGCAGGGACCGTAACTTTTCAACTATTCTGTCAATCATCTTCCTCCCTGAAGCGTAGGGTTTCTAAAAAATTCAGGTTTCCTGCTGCTTCTTCTTCCTATTCCTCGTTTTCTTTTCTTTTTCTTTTTTTTCTTTTTTCTTTTTTGCTGAATCGAGATCGCGATGCCGGACTATATCTCTTTTGATTTTGTTTCGGTTCGATATTGAAATTAAAATCGCGATTCAGTATTGGACTCCAATATTTTCGTTCTGAAATGGAATCGCACATTTTACACGGGTTGCGATCCAATTTAACTCTTGGATCGGGAAGGCTGCGATTCCTTCCAAATCGCGCGTTGGAACGTACGATCTCGCGATTTTTGCAATCACTGTATTTGACTGCTAAATACTGTTGTTGGTTCTTTATTAATTACATATATGCAGTTTAATAAAAACTTTGTAGCATCCAACATTGTATATAGCCGATCACTAATTTTCGGAGTTTCTTATCAGGATCGCACAAATTGAATTAATGTACTCCATTTGATTACTTTGCCGCAAGATATATGATAAAACTAAAGCAATTGATGAGGGGTATTTATGATGACAACTCCTAAAATATGTTCCGGTGTAAATGAATCAGTAACCTCTACTGCAAACCTAGCTTCAAAAGAAACCAATACAAATTCTACATTAGATTTATCCCAAATTTTAGTTGAAGTTGTTCCGAATGCCGAGTCCAACGTCGCTCAAACTTCAACAAACGATGAAATAAACAACTCACCAAATTTGTTTCAAAAATTAGATGATATCAATGTATCAGATACTCCAGAATCTTTGGATGGGTCAAAGGTTGATCCTGAAGTTGGCATGTTGTTTAACTCAGAAGAGCAAGCATTCAAATTCTACAACTCATATGCTAAAAGAAAGGGCTTCAGTGTAAGAAAAGGTCATCTCTCTAGAAGGAAAGATGGGACCATTAGAGATAGACATTACTTGTGTAGCAATGAAGGTACACGTAAAGAGCATCGAACTCACGTTACCAAGAAACCACGTGCACTTGAGAGAACTAACTGCTTGGCTCGTATAGAATTCAAAGTGAACCGTGATAACGTTTGGGTTATTAACAAGTTTCTTGATGATCATAATCACCCTCTTGCAAGCCCGAATAAAATACACATGTTAAGGTCACATAGAACAAAATTACCTGCTCAGCATGCTTTCATTACTGAAATGGATTATATTGGAGCGAAACCAACTCAAGTTTACGAGTCCCATAGAGAAAGTGCGCATAGTGATGAGAATTCTGGGTTCATATCTAAGAACCAAAGCTACAACTTGTTGGGTACGAATAGAATGAAAGATTTAGAGAAAGGAGATTCACAATTTTTCCTGGATTTTTTCAAAGCAAAACAAATGGAGGATCCTTCATTTTTCTATGCAGTGCAAGTCGATGAAAATGATAGAGTAACTAATTATTTTTGGGCAGATGCAAGATCAATACTTGATTATACATGTTTTGGTGATGCTCTTTTGCTCGATACAACGTATAGAGCAAGTAGATATGACATTCCATTCGCACCATTTATAGGCGTAAACCATCATAAGCAAATGGTTATATTTGGTGCTGCTTTGTTACTAGATGAATCTACAGAATCATTTGCATGGTTGTTCAAAACTTTTTTGGCTGCTATGAATGGAAGACAACCAAGAACGATATTAACAGATATTTCAGATTCATTATCTAGAGCTATCAGCATGACATTACCCGGAACTTATCATCAACATTGCATATGGCATATCATTCTGAATGCACCAAAAATTCTACCTCATGTTTATGGTCATGAGTCAAATTTTCAAAAAGAGTTTGAAAGCTGGATTTTTGAAAGTCGATGCGAAGAAGATATACAAAATGGACGGGAAAATTTATACACTAAATATAACCTAACGGGTAATTCGTGGTTCGAACAATTGTATTCAAGTAGAGAAAAATGGTCTTCAATTTATTCTAAAAATCCATTTTGCGCCAGCATGACAACGAAGCAATGGTGCGAGACAGTGGGAAACCAAATAAAGATGCTATTTTACAGAAAACTCCCTCCTTCGAAATTCATGCCACAATACCACAAAGCACTTGCTCAACTTCGTGAGAAAGAATCATCAGCAGATTACGAATCTCGAAAACTAAAACCTGTTCTAGTAGCGGATGTGCCAATGCTGATAGAAGCTTCTGAATCATATACACGAACAGTGTACAAAGAATTCGAAGTCGAATATAAAAGCCAACTAGCTTGCCTTTGCGAACCGGTCGAGATGAAAGGTACAATTTGCACTTTTAGGGTTTCGTATCCTCAAAAAAGAAGTTACGGGCTTGTTGAGTACGATACATCTAACGCTTTGGTAACGTGTAGTTGCAAGAAATTCGAAACTATGGGTGTGTTTTGCATGCATGCTTTGAAAGTTTTGAACTACAACAACATTTTGCACCTTCCACCGTGTTATGTGTTGAAGAGGTGGACGAAATTTGCGAAAGATGGGGTGGAATCTGCAAATAGTTATGATGGCGATGCACTGGGTTTGAAGTACGGTCAGGTTTGTCGTAAAGCTATGATGGTGGCTGTGAAAACTGCATTTTCAAAGGATGGGCTTGAGGTTTTGGAGCGTAGGATCGATAGGTTTATGGATCGGATGGTGTATGAAATGCATAATGATGGTTCGAGTAAGCAGATTGATGATATAAATATTGTTGATAGTATGCAGCAGAATGATTTGGAAGCTGCTAACATTTGCTTTGATGGGTTTTAAGGTACTTTTTTTAATATAGTTCTAGTGGTACTTTATGTGTGATGCATATCTTCACTGGTATTGTCTACCCTAATCTTCTCTTGTGGGTTAACTATTCTTGGTTTTAACTGACCTACAACTGGTTAATGAATTGATAATATACTTGTAGAAACATTAACTCTGCTCTTGCACAATATTCTCCTGAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020254947.1	1.1e-297	protein FAR1-RELATED SEQUENCE 5-like
Swissprot	Q9SZL8.1	8.1e-104	Protein FAR1-RELATED SEQUENCE 5
trEMBL	A0A2I0X1F3	6.1e-250	Protein FAR1-RELATED SEQUENCE

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G38180.1	34.89	4e-106	382	FRS5	FAR1-related sequence 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G07082	AT4G38180.1	599	375	6	55	647	48	637	34.89	4e-106	382
AfisC4G07082	AT4G15090.1	627	424	5	68	690	32	656	31.42	4e-93	339
AfisC4G07082	AT2G27110.2	635	379	13	59	685	32	623	32.28	2e-89	327

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03101.12	FAR1	Domain	101	187	78.0	6.2e-22
PF10551.6	MULE	Domain	311	402	96.2	1.2e-27

Gene Ontology

Accession	Ontology	Name
GO:0005488	F	binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006950	P	response to stress
GO:0010017	P	red or far-red light signaling pathway
GO:0010218	P	response to far red light
GO:0016620	F	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0044710	P	single-organism metabolic process
GO:0044763	P	single-organism cellular process
GO:0048518	P	positive regulation of biological process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K17604	ZSWIM3; zinc finger SWIM domain-containing protein 3	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network