result

Gene information

Detail information of AfisC4G07091

Location

Gene	Chr	Start	End	Strand
AfisC4G07091	chr4	1336401092	1336402715	-

Sequences

CDS

Protein

Gene

>AfisC4G07091
CTGCTCAAACAAAGTAACCAATAAATTATCAAAATTATCATAGAGAAAGACAAATTAATAGTATAGTATCTCAATCTTATCCATCTGAGGAGCATTATATATAAATATCCAAGCTTCTATAACTTGCATTTCAGTAAACCTTCATTAATACAACAATGAACAGCTATTCTGGTCAGGATCTAGACTTACCAGGCTTCAGGTTCCATCCTACGGAGGAAGAGCTGCTCGACTTTTACCTTAGAAAGATGGTCAATGGAACAAAGTTCCATTTTGAGATCATCGGAACCATTCATCTTTATCGCCATGAACCTCCTGAGCTACCTGGTAAATAAGTAACCAATTCTATCCATAACCTTTTGAGTTAATATGCATCAATCTCGTACTTATTTTTTTCGGAACCTTGCATTTTTTTTGTTAGGCATATCGATATTTCGAGAATATAAGTTAACCTTCTTAGAGTAATGTTTTCAAAACAAAAATGGCAAGTACATTTATGGAAGCTAACACTTATAGTTATGGATTAGGGCTAGCAATGATAGGGGAAAAAGAGTGGTACTTCTTTGTGCCAAGGGATAGGACACATGCAAATGGAGGACGACCAAATCGAACGACGGAAAAAGGGTTCTGGAAGGCTACAGGTTCAGACAGACCAATTCGAAGTGCGAGCAATCCCAAAAGACTGATTGGACTAAAGAAAACATTAGTTTATTACAAGGGACGTGCCCCACGAGGAACAAGGACTGACTGGGTCATGAACGAGTATCGATTCCCTGATACCGTCTCCATCCCCCCTCCTAAGGTAAATTTATTATTATTTATTATTATGAGAGAGAGAGGGCTAGGATACCTCCCTAGCACCATCACATATCACTCGATTTCAGTCGCACGTTTATATTTAAACATCAATTTCTCTCCTCTCTCACATGTGCTACATATTTAAATATTAAATATAAACGTGTATATGTGTGTGTATTATAGCAACTTATTTAAATATCCTAAAAAGAAGCTTTAATTGATAGCTTTTAAGTATTTCTAAGTGAATAGTTTAAATTAAAAGTATTTGGATAGGTAGAAATGATGATGAAATTTTGTTATAAAAATTGAAAGCAAATATTTGTTTACTTATTATCACCCTTCAGGTTTAAACAACAAGTTGTTGGCAAAACCTTCGTATTACAGAAATATCTAATCAGCTATTTGTGCTACTTAGAAGCTATTATCGAACACACTCGTAGGTTTCAAACTACATACTGATCAATAATTCGAAGTAAATGCAGGAGGATATAGTCATATGTAAGGTATACAAGAAGGCGGCGACGATGAAGGAGCTAGAGGAGCGTGCTGCTATGGAGAAGGCGAAATCGATACTGCTTAATTTCAGTGAAAACTGTTCAGATGATTCATTGAACAATATGGGAAAACGTGTAAGAGGAGGATCACTATCATCATCATCGATGATGACTGATGAGTCGATGATTGTTCATCAAGAGGGTGACACTCCAATTTATAGTAGTATGGAATGGTCGCAGGATAAATGGTTTCCCTATGACAATGTACTTGATTTTTGAACACGAAGTGGTTGAGATAGTTTTATGTAACCACTGATTCAAGTGATAAGACACCC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010918221.2	3.2e-76	NAC domain-containing protein 22
Swissprot	Q10S65.1	3.9e-71	NAC domain-containing protein 22
trEMBL	A0A6I9R5T1	2.3e-76	NAC domain-containing protein 22

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G17040.1	60.73	6e-68	253	anac036;NAC036	NAC domain containing protein 36

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G07091	AT2G17040.1	191	72	1	6	196	2	189	60.73	6e-68	253
AfisC4G07091	AT2G02450.2	149	57	1	11	159	52	198	60.40	1e-51	199
AfisC4G07091	AT2G02450.1	149	57	1	11	159	52	198	60.40	2e-51	198

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	12	137	88.2	4.6e-25

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0005992	P	trehalose biosynthetic process
GO:0006561	P	proline biosynthetic process
GO:0008361	P	regulation of cell size
GO:0009414	P	response to water deprivation
GO:0009416	P	response to light stimulus
GO:0009611	P	response to wounding
GO:0009620	P	response to fungus
GO:0009718	P	anthocyanin-containing compound biosynthetic process
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009744	P	response to sucrose
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009793	P	embryo development ending in seed dormancy
GO:0009825	P	multidimensional cell growth
GO:0009835	P	fruit ripening
GO:0010014	P	meristem initiation
GO:0010120	P	camalexin biosynthetic process
GO:0010223	P	secondary shoot formation
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0042538	P	hyperosmotic salinity response
GO:0043424	F	protein histidine kinase binding
GO:0043565	F	sequence-specific DNA binding
GO:0045770	P	positive regulation of asymmetric cell division
GO:0048103	P	somatic stem cell division
GO:0048467	P	gynoecium development
GO:0048829	P	root cap development
GO:0051782	P	negative regulation of cell division
GO:0090602	P	sieve element enucleation
GO:1900056	P	negative regulation of leaf senescence
GO:0090691

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network