result

Gene information

Detail information of AfisC5G00064

Location

Gene	Chr	Start	End	Strand
AfisC5G00064	chr5	10347480	10350919	+

Sequences

CDS

>AfisC5G00064
ATGGAAGCCGATGGCGCATCTTCATCCGAATCTTCATCAACGGTTAGGGGTACGTCCAACGGAAGCTCTTCGTCGGCGCTGCCTCCGCCGTTCTTGAGTAAGACTTACGACATGGTCGAAGATCCGACGAGTGATTCCATCGTTTCTTGGGGGGCGAATAATAATAGTTTCATAGTTTGGAATCCTCCTGAATTTGCCAGGGATTTGTTGCCCAAGTATTTTAAACACAATAATTTCTCCAGTTTTGTGCGTCAGTTGAATACCTATGGTTTCAGGAAAGTTGATCCCGACAAGTGGGAATTCGCAAATGAGGGTTTTTTAAGAGGTCAAAAACATCTTCTAAAGAGCATAACTAGAAAAAGATCATCTCATGCACAAACACCACCAGCACCCCCTCAACCTCAGAAGGCCGCTTGCGTAGAAGTAGGCAAGTTCGGGCTAGAGGAAGAGATCGAACAACTAAAGAGGGACAAAAACGTCCTAATGCAAGAGCTGGTCAGACTCAGACAACAGCAACAAACAACCGACAATAAACTGCACACATTAGGCGACAACCTTCATGGCATGGAGCAAAGACAGCAGCAAATGATGTCCTTCCTGGCTAAGGCAATGCAAAGCCCTGGCTTTTTAGCCCAGCTCGTGCAGAAAACTGATGCTAACAGAAGAATCACCATTGGCAACAAAAAGAGAAGGTACCCCAAGCAAGAACATAACCAAAGCAGCGATCAAGTATCAGCCGTTGATGGACAGCTGATCAAGTATCAGCCGTTGATCAACGAAGCTGCCAAATCGATGGTCCTTCAAATGCTCAATCTGGACAAGCCTTCTGATACTTTCTTGTTCGAAAACTTTATTAATGATAGCGTAAGCCTGCCTCGTACTTCTGGGGTTACCCTTAAAGAGGTTGTTCCTACAGGGATGTCTTATCTGCCTTCAGATTTTGATAAAATGCAAGGAATTAATCAAGAGTTTGCAAAGAAAGCTGTCGAGGAAGATGATAATAATATTGATTTCGATGCTTTGACCGATGGCTTTGATTTTTTGGATGGGATTGAGGATTTGCCGAGTATAGGAGATCCTTTTTGGGAACATTTGCTTCAGACCCCTAGCGGTGTAGATGATAGTGAGGAGCTGGTTATAGAAGGAGAGATTGGGTGGGACAGTTCTCAGAATGTGGAGAATCTGACTGAACAAATGGGTCATCTTTCTTCAGAGAATAAGAAATGA

Protein

Gene

>AfisC5G00064
TCGACATTCAAGGCAGTACGATATTTTCCACTTCCCTTTTCCGCTTTCTTCAAAAATCTTCATCTCCGATCCCAATTTCTCCGTCAACGTTACCGTTATCGTCTTTAGTGATGGAAGCCGATGGCGCATCTTCATCCGAATCTTCATCAACGGTTAGGGGTACGTCCAACGGAAGCTCTTCGTCGGCGCTGCCTCCGCCGTTCTTGAGTAAGACTTACGACATGGTCGAAGATCCGACGAGTGATTCCATCGTTTCTTGGGGGGCGAATAATAATAGTTTCATAGTTTGGAATCCTCCTGAATTTGCCAGGGATTTGTTGCCCAAGTATTTTAAACACAATAATTTCTCCAGTTTTGTGCGTCAGTTGAATACCTATGTAAGTTTCTTTGTTTTATTTAAACATATTCTGCTGATAGCAGCCAAGAATTAAATTTTGATACGGAATCCTCTTGTTTCTATTGAGTAGCAGAGTGATGTGATTTTGGAAATACAGCGTCAGTGATATGCAACAAGCGGGAAATTCCTACTTTTTTGAATTTTGACAATTGATGTATTAACTTGTTTTAATGCTCCCATGAAATATATAATCAAATCATTCTGATCAGTTATAAAAACGGTTATCGGCTCTATCACCTTTGGTTGCCATGATCGTTGTTTACTTGTGAAATTTAGCAAGATATTGTATGCTCAACAAGTGTATTTTCCTATTTGTACTGGAAGTTCAGTTTCTTCTGTAAATTGGTATCTTTGATAAACATAGCAGTTCCTTCCTTTCTACCCGATCAATCCCTTAAAATGTGTAAATGAGTCAAACAGTGTGTCATGTCATCAGTTATTGATAAATTTCTAAAACAACTAGATCTTATTGTGCTGATACGTGTTTTAGATGCTCATGTTTGAGTATTACTAAAGTATAATGTTTTGAGTATTCATAATAACTACAACACGAAGAAGAGTTATCTTCTATCTGCACTTCAAGCATGTTGTATAACTTCATTAGGGATCACTTTGATACAGCTAGCAGATAAACGTGATAACCACTTCTTTTGATCGGGTCCTTAACATTTTATATGAATTAAACAATATGACATGCCATCAACTATCGATAAATATCTAAGCTTGACTTATTCTTTCTAAGCAGATGTTGGTTATGAGTGCACATGTTTAATTAGGGCTGTTATGGTAACGGTAAATTTAACATTACCATACCATTACCAGCCAATCGGTTAACATTTTCGAGTGCAATCGGTATACCAGTTTAATTGGTATGGTAACGGTAAATTTACCATTTTCTACGGTAAATCATCGGTAACATTTCTTCAATACCAGCGGTAACGGTAATTTTACCAGTCAATTTATAATACATGTATATTCATGTAACATGCTTTATTATAGGCATTTAGAATCAAGCAAATGATTAAATTAGTTTATTAACCAGGTGAAATAATGTTAAATACACTTCACTTCTTTTTCATTTTTTTTTTTATTAAGTAACACTATAAATTGTATAATGAAGCACCGTTATGGTGTGAATACGTGTTATGTTACTTACATTTTTTAGACAAACGGTAATTTACCATTACCAGTGTAACGGTTACCAGATTATCGGTATACCAGCCTATCGGTAACGGTAAGCAATTTTCGCTTACCAGTAAAAATGGTACGGTAACGGTATTTGTGAAATGGTAACGGTAACCATTACCATAACAGCCCTATGTTTAATTGTTGCTATTGTTAACTTCAAACCTACTATTTTATAATTTTTATACTTCATATGTCAGTCTTTCCTTCAACAATTAACATTAACATTTGATGCATCCATGTGCTGATTATGATTCATATTACATCTTCTTATTTACTGTAAAGACGCATAATCATTGTTTGAGTACCTAACCCAGTTGATTTGGTCACATGGTTTGATTCTATGACATTCAATTAACAGTATAATTATAATTTATTTATTTATTTTATTTTATTTGTTATTGTTGTTCCTATGAGTAAACATAACTTGAAACGAAAGTCAAAATGAAAAGAAACATTCTAATATTCAATTCCCATTCACTCCTGCTTAAATAGTTTCAAACTTTGTTTTGCCTGTTGCTTTGACATTAACTTCTCAATGTACTTATGTTCTTGTCAACTATTGTAGGGTTTCAGGAAAGTTGATCCCGACAAGTGGGAATTCGCAAATGAGGGTTTTTTAAGAGGTCAAAAACATCTTCTAAAGAGCATAACTAGAAAAAGATCATCTCATGCACAAACACCACCAGCACCCCCTCAACCTCAGAAGGCCGCTTGCGTAGAAGTAGGCAAGTTCGGGCTAGAGGAAGAGATCGAACAACTAAAGAGGGACAAAAACGTCCTAATGCAAGAGCTGGTCAGACTCAGACAACAGCAACAAACAACCGACAATAAACTGCACACATTAGGCGACAACCTTCATGGCATGGAGCAAAGACAGCAGCAAATGATGTCCTTCCTGGCTAAGGCAATGCAAAGCCCTGGCTTTTTAGCCCAGCTCGTGCAGAAAACTGATGCTAACAGAAGAATCACCATTGGCAACAAAAAGAGAAGGTACCCCAAGCAAGAACATAACCAAAGCAGCGATCAAGTATCAGCCGTTGATGGACAGCTGATCAAGTATCAGCCGTTGATCAACGAAGCTGCCAAATCGATGGTCCTTCAAATGCTCAATCTGGACAAGCCTTCTGATACTTTCTTGTTCGAAAACTTTATTAATGATAGCGTAAGCCTGCCTCGTACTTCTGGGGTTACCCTTAAAGAGGTTGTTCCTACAGGGATGTCTTATCTGCCTTCAGATTTTGATAAAATGCAAGGAATTAATCAAGAGTTTGCAAAGAAAGCTGTCGAGGAAGATGATAATAATATTGATTTCGATGCTTTGACCGATGGCTTTGATTTTTTGGATGGGATTGAGGATTTGCCGAGTATAGGAGATCCTTTTTGGGAACATTTGCTTCAGACCCCTAGCGGTGTAGATGATAGTGAGGAGCTGGTTATAGAAGGAGAGATTGGGTGGGACAGTTCTCAGAATGTGGAGAATCTGACTGAACAAATGGGTCATCTTTCTTCAGAGAATAAGAAATGAGTTGAGCTTCTTTTTTATCTGTGCATATACTGCCTTAACTTATATGAGTTGAGCCGATGTTGGTATCCCTTGTAACTGCGCTGCTGCGGTGATCTTCGTTCTTCAGGTACTATTGTATACATATGTACATGCCATTCCACGGTCTTTTCGTATGTTGTATTGATCAATATGGATTTTTTTTAATATTTTTTTTACCCAGTTATGATCATCTTGTTAGATGTGCATGAATTAGTTATGGAATGTATAGTTACTGGAGTAATTTATGATTGATCATTGAGCTGAAACTCAGACAGAAGCTTCAGCTGAGTCATGCATATTGATCATAGTTGG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020242275.1	8.4e-130	LOW QUALITY PROTEIN: heat stress transcription factor A-1-like
Swissprot	Q84T61.1	1.4e-102	Heat stress transcription factor 3
trEMBL	A0A5J6SCC5	9.0e-126	Myb-like transcription factor (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G16820.1	47.03	2e-99	359	ATHSF3;ATHSFA1B;HSF3;HSFA1B	heat shock factor 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G00064	AT5G16820.2	455	166	12	29	408	26	480	47.03	2e-99	359
AfisC5G00064	AT5G16820.1	455	166	12	29	408	26	480	47.03	2e-99	359
AfisC5G00064	AT4G17750.1	324	90	8	23	312	45	358	58.64	6e-97	351

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00447.14	HSF_DNA-bind	Family	31	120	111.0	2.9e-32

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0042802	F	identical protein binding
GO:0009507	C	chloroplast
GO:0009644	P	response to high light intensity
GO:0010200	P	response to chitin
GO:0010286	P	heat acclimation
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0032268	P	regulation of cellular protein metabolic process
GO:0034605	P	cellular response to heat
GO:0034620	P	cellular response to unfolded protein
GO:0042542	P	response to hydrogen peroxide
GO:0071456	P	cellular response to hypoxia

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09419	HSFF; heat shock transcription factor, other eukaryote	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network