result

Gene information

Detail information of AfisC5G01344

Location

Gene	Chr	Start	End	Strand
AfisC5G01344	chr5	252173349	252176639	-

Sequences

CDS

>AfisC5G01344
ATGCTCCATCTCGTACTCTTCTTCTTCCTCTTCTCATCTTCGTCTGCATCGACCATCCTTGAAAAACAAACACTCCTCCAACTCAAACAATCATTCAACAACCCCTCCTCTCTTTCCTCATGGTCCAACTCTTCTTCAAACCACTGCAACTGGTTCGGAATCTCATGCAACAACACCACGAACTCCATAATCTCTATCTCTCTTCCTAATCTTTCCCTTACCGGTCAAATTCCGCCTTCCATTTCCACCCTCAAAAGCCTCTCCTTTCTCCATCTTTCGAACAACTCCTTCTCCGGAAACTTCCCAAAAGCATTCTACAACTGTGCAAGCTTAACTTACATAGACATCTCAGAAAACTTGTTCATAGGTAATCTCCCAGATGATATTCATCTTCTTCCTAACACGCTTACATCTCTCTATCTCTATAACAATAACTTCACTGGTGATATTCCAACCTCCATTGGAAAGTTAACTTCTTTACAGACATTGTCAATGGAAGGCAATTTGTTTAATGGGTCGTTTCCGAAAGAGATAGGAAACTTAACCAATCTTAAAATTCTTCAAATGGCTTACAATCCATTTGCACCACAAAGCATTCCAGATGAATTTGGCAACTTGACGAGTTTGAACGTTTTGTGGATGACTGGAATGAATATAATAGGTGAAATACCGAATTTTCAAAGGTTGGTGAATCTGCAGCAGCTGGATTTATCGATAAATTTACTTACAGGTAAAATTCCTGGATCTATATGGATGCTTGAGAACCTTCAAGAGCTATTTTTATACAAAAATAAGCTAAGTGGTAGTATTGAAATCGATGCACCTATTAAAGCGATTGGTTTGCAAAGCATTGATGTATCAAATAATCAGTTATCAGGTTCAATCCCTGATGAATTTGGAGGTTTGAAGAATTTATCAATACTTCTGTTATACTACAATAATTTTACTGGAGAAATTCCCAGAAGCATTGGACTGCTTCCTTCTCTCAGCGATTTTCGAGCTTTCGGGAATTCTTTAACTGGGATCCTGCCTTTTGATTTTGGAAAGAATGCTCCTTTATGGAATATCGAGATTAATGATAATTCGATTTCGGGTGTATTGCCCGAAACTTTATGTTCTAGAGGAGCTCTTGCTTCTATAGTTGTGTTCAATAATAATTTTTCAGGAAGTATTCCTGAATCCTTAGGTGAATGTGCTACACTAGATAACCTGATGTTGCAAAGCAATAGGTTTTCTGGTAACTTTCCTGGTAAAATTTGGTCTGCTGCAAATTTATCAACTGTGATATTACATGATAATGAATTTTCAGGCCAACTTCCACAGAAAATGCCCTGGAATCTTACTAGAATGGAGATTCAGAACAATAGATTCTCTGGAAAGATCCCTTCTATATCGGAGAATCTTATTGTGTTTCTTGCTGATAACAATCTGTTTTCTGGTGATTTACCTGTTACGCTGAACAGACTTTCAATGCTGCAGAGTTTTTCACTAGGCGGTAATATGATTTCGGGTACCATGCCAGAAGAAATATCAAGCTTAAAATCTTTAACAGATTTGAATTTAAGTAGTAATCAGCTAGTTGGAGAAATTCCTTCTTCTATTAGTTTATTACCAGTGCTCAGTTCACTCGATCTTTCGAATAACCATCTAACTGGTAAGCTTACGGCGGTAGGAAACAACCTTAAGCTGAATTTTCTGAACTTATCGAGCAACAATTTCTATGGGCAAGTTCCATATGCATTGCAAAACCAAGCTTACGATCGAAGCTTTCTATCGAATGCCAATCTTTGTTCTTGGGATACTTCGTTGGGTCTTTCGAGTTGTGGTAAGATTTCGAAGAGTTCGAGTTCTTTGTCTACGGGGCTTGTGGCTATGATCATAGTTCTCGGATTTGTTATTTTCTTCGTTGGTTTGTTCTTTGTGTTTTTGGTTGTTAGAGATTATTCAAGGAGGAAGGATGGGTTTGATCACGCGTCATGGAAGCTTACTTCTTTTCATTCTTTGAATTTCAACGAGTCTACCATCGTGAAGGGGCTCGTAGAGGATAATGTCATCGGAAGTGGGGGTTCTGGAATGGTTTATCAGGTCATGATTGGTAATCATGCAGATGAAGTGGTCGCTGTGAAAAAGATATGGAACAAAAACAAGACAGATTCGAACTTGGAGCGAGAATTCATATCGGAAATACAAATACTCAGCTCGATCCGACATGCAAACATAGTGAAACTTCTGTGTTGCATTTCGAGCCACGATTCGAAGTTGCTAGTGTACCAGTACATGAAGAATGGAAGTCTAGATAGATGGTTGCATGCAAAGAGGAGGCCCGAGGGCCCACCGTTGATAAGGAGTAGGTCGGGCCACGCTGTGGCCTTGGATTGGCCCAGAAGGCTAGGTATTGCCATAGGGGCTGCGAGAGGGCTGAGCTACATGCATCACGATTGCTTGCCGCCTATCGTCCATAGAGATGTGAAGTCAAGTAACATACTGTTGGATTCAGAGTTTCGGGCTAGGGTTGCGGATTTTGGGTTGGCCCGTATGCTTGTTAGACCCGGGGAGGCTAATTCTGTTACTGCGGTTGCTGGTTCCTTCGGATACATGGCTCCAGAGTGTGCATATGCAGCAAAAGTGAATGAAAAGATGGACGTGTACAGCTTTGGAGTAGTTCTACTGGAGCTTACGACAGGAAGAGAAGCAAGCAATGGAGGTACAGAAGGTAGCCTAGTGGATTGGGCATGGCACCATTTTCAAGTAGGAAACAGAACAATAGATGCAATCGATGATAGTATAAAAGATCCAGTTTATTTGGACGATATAGCTAAAGTTATGAAAGTAGGACTGATATGCACAGGCACATTGCCTTCGACTAGACCTACCATGAAAGAAGTTGTAGAGATGTTGCTAAGCTGTGATCAAACAAACTGGAATGGGGAAAAGACGGTAAACGAGCGAGAAAACGCTCCTCTGTTGAAAATTGCTAGAAGCGTCAAAGGTAAAATCAGTTCGAGTAATGAAGGCGATGAAGTTGATTACTGCAAGTTATGA

Protein

>AfisC5G01344
MLHLVLFFFLFSSSSASTILEKQTLLQLKQSFNNPSSLSSWSNSSSNHCNWFGISCNNTTNSIISISLPNLSLTGQIPPSISTLKSLSFLHLSNNSFSGNFPKAFYNCASLTYIDISENLFIGNLPDDIHLLPNTLTSLYLYNNNFTGDIPTSIGKLTSLQTLSMEGNLFNGSFPKEIGNLTNLKILQMAYNPFAPQSIPDEFGNLTSLNVLWMTGMNIIGEIPNFQRLVNLQQLDLSINLLTGKIPGSIWMLENLQELFLYKNKLSGSIEIDAPIKAIGLQSIDVSNNQLSGSIPDEFGGLKNLSILLLYYNNFTGEIPRSIGLLPSLSDFRAFGNSLTGILPFDFGKNAPLWNIEINDNSISGVLPETLCSRGALASIVVFNNNFSGSIPESLGECATLDNLMLQSNRFSGNFPGKIWSAANLSTVILHDNEFSGQLPQKMPWNLTRMEIQNNRFSGKIPSISENLIVFLADNNLFSGDLPVTLNRLSMLQSFSLGGNMISGTMPEEISSLKSLTDLNLSSNQLVGEIPSSISLLPVLSSLDLSNNHLTGKLTAVGNNLKLNFLNLSSNNFYGQVPYALQNQAYDRSFLSNANLCSWDTSLGLSSCGKISKSSSSLSTGLVAMIIVLGFVIFFVGLFFVFLVVRDYSRRKDGFDHASWKLTSFHSLNFNESTIVKGLVEDNVIGSGGSGMVYQVMIGNHADEVVAVKKIWNKNKTDSNLEREFISEIQILSSIRHANIVKLLCCISSHDSKLLVYQYMKNGSLDRWLHAKRRPEGPPLIRSRSGHAVALDWPRRLGIAIGAARGLSYMHHDCLPPIVHRDVKSSNILLDSEFRARVADFGLARMLVRPGEANSVTAVAGSFGYMAPECAYAAKVNEKMDVYSFGVVLLELTTGREASNGGTEGSLVDWAWHHFQVGNRTIDAIDDSIKDPVYLDDIAKVMKVGLICTGTLPSTRPTMKEVVEMLLSCDQTNWNGEKTVNERENAPLLKIARSVKGKISSSNEGDEVDYCKL

Gene

>AfisC5G01344
CAAGAATGCGAAAACAATAACAAACTCCAAACAAAGAACACAAAAGAAAAGAAGAAGAAGAAGAAAAATAATCATGCTCCATCTCGTACTCTTCTTCTTCCTCTTCTCATCTTCGTCTGCATCGACCATCCTTGAAAAACAAACACTCCTCCAACTCAAACAATCATTCAACAACCCCTCCTCTCTTTCCTCATGGTCCAACTCTTCTTCAAACCACTGCAACTGGTTCGGAATCTCATGCAACAACACCACGAACTCCATAATCTCTATCTCTCTTCCTAATCTTTCCCTTACCGGTCAAATTCCGCCTTCCATTTCCACCCTCAAAAGCCTCTCCTTTCTCCATCTTTCGAACAACTCCTTCTCCGGAAACTTCCCAAAAGCATTCTACAACTGTGCAAGCTTAACTTACATAGACATCTCAGAAAACTTGTTCATAGGTAATCTCCCAGATGATATTCATCTTCTTCCTAACACGCTTACATCTCTCTATCTCTATAACAATAACTTCACTGGTGATATTCCAACCTCCATTGGAAAGTTAACTTCTTTACAGACATTGTCAATGGAAGGCAATTTGTTTAATGGGTCGTTTCCGAAAGAGATAGGAAACTTAACCAATCTTAAAATTCTTCAAATGGCTTACAATCCATTTGCACCACAAAGCATTCCAGATGAATTTGGCAACTTGACGAGTTTGAACGTTTTGTGGATGACTGGAATGAATATAATAGGTGAAATACCGAATTTTCAAAGGTTGGTGAATCTGCAGCAGCTGGATTTATCGATAAATTTACTTACAGGTAAAATTCCTGGATCTATATGGATGCTTGAGAACCTTCAAGAGCTATTTTTATACAAAAATAAGCTAAGTGGTAGTATTGAAATCGATGCACCTATTAAAGCGATTGGTTTGCAAAGCATTGATGTATCAAATAATCAGTTATCAGGTTCAATCCCTGATGAATTTGGAGGTTTGAAGAATTTATCAATACTTCTGTTATACTACAATAATTTTACTGGAGAAATTCCCAGAAGCATTGGACTGCTTCCTTCTCTCAGCGATTTTCGAGCTTTCGGGAATTCTTTAACTGGGATCCTGCCTTTTGATTTTGGAAAGAATGCTCCTTTATGGAATATCGAGATTAATGATAATTCGATTTCGGGTGTATTGCCCGAAACTTTATGTTCTAGAGGAGCTCTTGCTTCTATAGTTGTGTTCAATAATAATTTTTCAGGAAGTATTCCTGAATCCTTAGGTGAATGTGCTACACTAGATAACCTGATGTTGCAAAGCAATAGGTTTTCTGGTAACTTTCCTGGTAAAATTTGGTCTGCTGCAAATTTATCAACTGTGATATTACATGATAATGAATTTTCAGGCCAACTTCCACAGAAAATGCCCTGGAATCTTACTAGAATGGAGATTCAGAACAATAGATTCTCTGGAAAGATCCCTTCTATATCGGAGAATCTTATTGTGTTTCTTGCTGATAACAATCTGTTTTCTGGTGATTTACCTGTTACGCTGAACAGACTTTCAATGCTGCAGAGTTTTTCACTAGGCGGTAATATGATTTCGGGTACCATGCCAGAAGAAATATCAAGCTTAAAATCTTTAACAGATTTGAATTTAAGTAGTAATCAGCTAGTTGGAGAAATTCCTTCTTCTATTAGTTTATTACCAGTGCTCAGTTCACTCGATCTTTCGAATAACCATCTAACTGGTAAGCTTACGGCGGTAGGAAACAACCTTAAGCTGAATTTTCTGAACTTATCGAGCAACAATTTCTATGGGCAAGTTCCATATGCATTGCAAAACCAAGCTTACGATCGAAGCTTTCTATCGAATGCCAATCTTTGTTCTTGGGATACTTCGTTGGGTCTTTCGAGTTGTGGTAAGATTTCGAAGAGTTCGAGTTCTTTGTCTACGGGGCTTGTGGCTATGATCATAGTTCTCGGATTTGTTATTTTCTTCGTTGGTTTGTTCTTTGTGTTTTTGGTTGTTAGAGATTATTCAAGGAGGAAGGATGGGTTTGATCACGCGTCATGGAAGCTTACTTCTTTTCATTCTTTGAATTTCAACGAGTCTACCATCGTGAAGGGGCTCGTAGAGGATAATGTCATCGGAAGTGGGGGTTCTGGAATGGTTTATCAGGTCATGATTGGTAATCATGCAGGTACTATAGTCCTTAGCTTTTATCAAGTTTACATCAGTCCGATTATTTCTCTTTGTTTGTAGTACTCTTTACATTATAATTTGATGCCATTCAAACAGATGAAGTGGTCGCTGTGAAAAAGATATGGAACAAAAACAAGACAGATTCGAACTTGGAGCGAGAATTCATATCGGAAATACAAATACTCAGCTCGATCCGACATGCAAACATAGTGAAACTTCTGTGTTGCATTTCGAGCCACGATTCGAAGTTGCTAGTGTACCAGTACATGAAGAATGGAAGTCTAGATAGATGGTTGCATGCAAAGAGGAGGCCCGAGGGCCCACCGTTGATAAGGAGTAGGTCGGGCCACGCTGTGGCCTTGGATTGGCCCAGAAGGCTAGGTATTGCCATAGGGGCTGCGAGAGGGCTGAGCTACATGCATCACGATTGCTTGCCGCCTATCGTCCATAGAGATGTGAAGTCAAGTAACATACTGTTGGATTCAGAGTTTCGGGCTAGGGTTGCGGATTTTGGGTTGGCCCGTATGCTTGTTAGACCCGGGGAGGCTAATTCTGTTACTGCGGTTGCTGGTTCCTTCGGATACATGGCTCCAGGTATGATTTACTTTAGCATGTATATATATTGTATAAATAACCAATAATAATAGTAATGATAAGATACTTGTTGTGCAGAGTGTGCATATGCAGCAAAAGTGAATGAAAAGATGGACGTGTACAGCTTTGGAGTAGTTCTACTGGAGCTTACGACAGGAAGAGAAGCAAGCAATGGAGGTACAGAAGGTAGCCTAGTGGATTGGGCATGGCACCATTTTCAAGTAGGAAACAGAACAATAGATGCAATCGATGATAGTATAAAAGATCCAGTTTATTTGGACGATATAGCTAAAGTTATGAAAGTAGGACTGATATGCACAGGCACATTGCCTTCGACTAGACCTACCATGAAAGAAGTTGTAGAGATGTTGCTAAGCTGTGATCAAACAAACTGGAATGGGGAAAAGACGGTAAACGAGCGAGAAAACGCTCCTCTGTTGAAAATTGCTAGAAGCGTCAAAGGTAAAATCAGTTCGAGTAATGAAGGCGATGAAGTTGATTACTGCAAGTTATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020266819.1	1.9e-159	LOW QUALITY PROTEIN: receptor-like protein kinase 5
Swissprot	Q9SGP2.1	1.6e-70	Protein HAESA-LIKE1
trEMBL	A0A8B9ADK6	4.5e-142	receptor-like protein kinase HSL1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G25930.1	47.38	0.0	884		Protein kinase family protein with leucine-rich repeat domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC5G01344	AT5G25930.1	994	497	11	21	1007	26	1000	47.38	884
AfisC5G01344	AT1G28440.1	964	517	18	25	966	23	959	41.29	683
AfisC5G01344	AT4G28490.1	962	524	20	25	966	28	964	40.85	633

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	21	57	43.4	2.7e-11
PF13855.3	LRR_8	Repeat	135	193	27.2	2.2e-06
PF00069.22	Pkinase	Domain	681	964	147.1	5.3e-43

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0001944	P	vasculature development
GO:0005829	C	cytosol
GO:0004672	F	protein kinase activity
GO:0005634	C	nucleus
GO:0005983	P	starch catabolic process
GO:0006351	P	transcription, DNA-templated
GO:0006979	P	response to oxidative stress
GO:0009414	P	response to water deprivation
GO:0009570	C	chloroplast stroma
GO:0009934	P	regulation of meristem structural organization
GO:0010030	P	positive regulation of seed germination
GO:0010051	P	xylem and phloem pattern formation
GO:0010067	P	procambium histogenesis
GO:0010082	P	regulation of root meristem growth
GO:0010089	P	xylem development
GO:0010102	P	lateral root morphogenesis
GO:0010183	P	pollen tube guidance
GO:0010223	P	secondary shoot formation
GO:0010227	P	floral organ abscission
GO:0010468	P	regulation of gene expression
GO:0010480	P	microsporocyte differentiation
GO:0016161	F	beta-amylase activity
GO:0017046	F	peptide hormone binding
GO:0033612	F	receptor serine/threonine kinase binding
GO:0043565	F	sequence-specific DNA binding
GO:0043621	F	protein self-association
GO:0045490	P	pectin catabolic process
GO:0046777	P	protein autophosphorylation
GO:0048229	P	gametophyte development
GO:0050794	P	regulation of cellular process
GO:0051301	P	cell division
GO:0090406	C	pollen tube
GO:0090548	P	response to nitrate starvation
GO:1902025	P	nitrate import
GO:2000034	P	regulation of seed maturation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00924	E2.7.1.-; kinase	EC:2.7.1.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network