Detail information of AfisC5G01864


Location
GeneChrStartEndStrand
AfisC5G01864chr5351790175351797265-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020256822.17.9e-46homeobox-leucine zipper protein ROC8-like isoform X1
SwissprotQ9FX31.16.9e-39Protein HOMEODOMAIN GLABROUS 11
trEMBLA0A5P1FA695.7e-46Homeobox-leucine zipper protein HDG11-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G73360.146.307e-41 164AtEDT1;ATHDG11;EDT1;HDG11homeodomain GLABROUS 11

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01852.16STARTDomain4318682.03.5e-23

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006351Ptranscription, DNA-templated
GO:0009828Pplant-type cell wall loosening
GO:0009845Pseed germination
GO:0009913Pepidermal cell differentiation
GO:0010091Ptrichome branching
GO:0042335Pcuticle development
GO:0043481Panthocyanin accumulation in tissues in response to UV light
GO:0048497Pmaintenance of floral organ identity
GO:0048765Proot hair cell differentiation
GO:0048825Pcotyledon development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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