result

Gene information

Detail information of AfisC5G03106

Location

Gene	Chr	Start	End	Strand
AfisC5G03106	chr5	575922239	575923662	+

Sequences

CDS

Protein

Gene

>AfisC5G03106
ATGAAGCAAAACTTATTGCTAAACTTCAGCATCGAAATCTTGTTCGACTTCTTGGTTGTTGCATTCAAAGAGAAGAAAGGATGTTGATATACGAGTATTTGCCCAATAAAAGCTTAGATGCTTTTTTATTTGGTATATCTTTACTTGCTTTAATAGTGATTAATTATCCATCAAGTTTGATATCAAAACTTACACATTGGTTTTCATTTTCTACTTTCTAGTATCATGAGATGAGACAAAGTGAGCATACGTTAAACTGAAATGTCTTCTCAAAGAATATGGACTAGATTTTTCATCTGGTAAATATTAAAATTTAACTTTGATCTTCTATGCCATTTTAACCTTTGCAAAATTTTGTTCTTCCATAACTATACATCTAGTTTCTATATGTGGTTTAACTTAGTGTGTTGCACGTGCATTATGCATCATTCATGAGGAAGAAAATTTATTCATTAGTAGTATAATTGTATAACAAATGGAACTCCAAATGTCAATTCATTGACCGAGCCTTGTACTGACCAATGAAAATGTGTTCAGATAATTAAGTAAATGCAAGAGTAATTTTTGCCTTTCTTTTTTATGTCAGTGTTATGGATAATGTTTACTAGGAATTTAGTTCTTTCAGGAAAGGAAGGAGATGCATTTCTGGATTGGAAAACTAGATTCAATGTTATTATGGGAATTGCTAGAAGTGTTCTCTATCTTCACCATGACTCAAGATTTCGAATTATTCACAGAGATCTCAAAGCAAGCAACATTCTTCTCGACAAAGATATGAACCCCAAAATTTCAGACTTCGGAATGGCCAGAATTTTTGGTGGTGATGAAACAGACTTTAATACAAGAAAAGTTGTTGGTACATTGTAAGTTTCTTACAGCTCTACCTTCCAAGCAGCATACATTTTTATATGTACATAATATTTGTTCTATGTTGTCTCTTTCAGTGGATACATGTCACCTGAGTACGTGTTGCAGGGAATTTTTTCAATGAAGTCGGATATATTTAGTTTTGGTGTTTTAGTTCTAGAGATCATAAGTGGGAAGAAAAACCGAGGGGTATACACTGTCTCTACTCATCTAAACCTCTTATCTCATGTGAGTAAATCTGAATTAATTTTAAACGCTTTAGTTTTATCGTTCAAAGTAGATGACTTATCAGTCTGTTCCAGGTTTGGGATTTATGGAAGGAAAGCGAGAGTCTGCAACTTGTCGATGACAAGATAGTGAATAGTGCTCCTGTTAATGAAATCGTTAAATGCATCAAAATTGGCCTATTGTGCGTTCAAGAAAGACCAGAAAATCGCCCACTGATGCCATCTGTAATAGAAATGTTTAGCAGAGATATTACTTTACTACCAGAACCTAATCCTCCTGGCTTCGTAACCAGATTTGCTCCTCTTGACTTAATAAATGTTCAAGAATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020273246.1	3.0e-85	G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1
Swissprot	Q39086.1	5.9e-70	S-domain-1 (SD1) receptor kinase 7
trEMBL	A0A6I9QLC7	2.2e-82	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G65790.1	61.95	7e-74	273	ARK1;RK1	receptor kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G03106	AT1G65790.1	205	74	1	48	248	613	817	61.95	7e-74	273
AfisC5G03106	AT1G65800.1	198	69	1	48	241	617	814	63.13	8e-73	270
AfisC5G03106	AT4G21380.1	203	73	1	42	241	614	816	62.56	2e-71	265

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	43	224	95.1	3.7e-27

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000166	F	nucleotide binding
GO:0000302	P	response to reactive oxygen species
GO:0042742	P	defense response to bacterium
GO:0005773	C	vacuole
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0030246	F	carbohydrate binding
GO:0005634	C	nucleus
GO:0012501	P	programmed cell death
GO:0009506	C	plasmodesma
GO:0009751	P	response to salicylic acid
GO:0031625	F	ubiquitin protein ligase binding
GO:0046777	P	protein autophosphorylation
GO:0048544	P	recognition of pollen
GO:0071215	P	cellular response to abscisic acid stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network