result

Gene information

Detail information of AfisC5G04403


Location
GeneChrStartEndStrand
AfisC5G04403chr5809804128809804743+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_027352863.12.2e-13zinc finger protein ZAT11-like
SwissprotQ9LFG0.15.3e-12Zinc finger protein ZAT18
trEMBLA0A8T1RHF41.2e-13Zinc finger protein ZAT11-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G53600.148.785e-24 106C2H2-type zinc finger family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13912.3zf-C2H2_6Domain457047.41.1e-12
PF13912.3zf-C2H2_6Domain9211640.12.1e-10

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0006979Presponse to oxidative stress
GO:0008270Fzinc ion binding
GO:0009408Presponse to heat
GO:0009611Presponse to wounding
GO:0009631Pcold acclimation
GO:0009643Pphotosynthetic acclimation
GO:0010200Presponse to chitin
GO:0010224Presponse to UV-B
GO:0044212Ftranscription regulatory region DNA binding
GO:0042538Phyperosmotic salinity response
GO:0043565Fsequence-specific DNA binding
GO:0045926Pnegative regulation of growth
GO:0071289Pcellular response to nickel ion
GO:2000280Pregulation of root development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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