result

Gene information

Detail information of AfisC5G05364

Location

Gene	Chr	Start	End	Strand
AfisC5G05364	chr5	989214494	989219244	-

Sequences

CDS

>AfisC5G05364
ATGTGTGACTTCTTTTGGCAAAGAATGGAAAACAACACAGATCAACTAGGCGGAGATTTATCCGACATCATTCGCAGCAGTCTAAACCAGTCCGACACCCAATCACCAACCGACACCTGGCACTTCCCTACTGTTGATTCTGACCTTATGTCCTTTGATCGGCAGACATCCACCAACAATGACTACATCGACCAAGGCGATTTGTTTGGCATGAGCGACCAACTTGTTGTGGCTAGCAATGATGTAAAAAACCAGGGTTCTAACAACCTTTTTTCTCGGGTGCTTCAAATATCGCCTATTAAACATTCTCCGATTTCTCCTAGGGCGATAAGGCCGACTTTACATCATGATCATATGGTTAAAATTGATCATACTGCTCAGATCTCTTCTTCTTCCCGCCCTCCTCCTGTTGGAACTAAAAGAAGAAAGGGGCAAGGGAAAAAAGTGGTGTGTGTACCAGCACCGGCAGCAGCAAGCAGTAGATCAAGTGGAGAAGTGGTACCATCTGACCTTTGGGCTTGGAGGAAGTATGGCCAGAAACCTATTAAGGGTTCTCCTTATCCCAGGGGATATTACAGATGCAGCAGCTCAAAAGGATGCTCCGCAAGAAAACAAGTAGAAAGAAGCAGAACCGACCCGAACATGCTAGTCATCACCTACACATCCGACCACAACCACCCTTGGCCTACTCAACGTAATGCACTTGCTGGCTCCACCCGATTCCAACCTTCCAAATCCAAAATCAACACCTCCGCCTCTTCCTCTTCTTCTAAAAAAGCTAGTAACAGCACAAAAGATAACCAGTCAGAAAAAAGTAACACTGATACTAAAACCGTCAACGTGAAAGAAGAACTGATACTAAATGAGCAAATTCCAATGGATAATGATTACACATTCAATCAAGATTTATATAACGACCCATTGATTAGTTCGTGCAGTCACACGGATGACTTCTTTGCGGATTTGGCAGAGCTGGAGAGTGACCCGATGAGCCTCATTTTTACAACACGGGATGATGAAGAAGATCAAAAAGGGAGTGATAAAGGATTGGCCGTTGATCCATTTGTTAACATGTTTGATTGGGGTAAAGGTTTATAA

Protein

Gene

>AfisC5G05364
TCTTCTTCTTCAACATACAAACACAGTCCCTTCTCTCAATTTCCTAACCAACCAAGATTACAGATAACTTCTCATTTTCATAGTTACTCATCCTTTTACATGGTATACCGACACATATTCATATTCTTTAGCTCAAAAGAAATTTGCAGCTTTTGTTAAAAGGTCCTTACCAGTTACTATGTGTGACTTCTTTTGGCAAAGAATGGAAAACAACACAGATCAACTAGGCGGAGATTTATCCGACATCATTCGCAGCAGTCTAAACCAGTCCGACACCCAATCACCAACCGACACCTGGCACTTCCCTACTGTTGATTCTGACCTTATGTCCTTTGATCGGCAGACATCCACCAACAATGACTACATCGACCAAGGCGATTTGTTTGGCATGAGCGACCAACTTGTTGTGGCTAGCAATGATGTAAAAAACCAGGGTTCTAACAACCTTTTTTCTCGGGTGCTTCAAATATCGCCTATTAAACATTCTCCGATTTCTCCTAGGGCGATAAGGCCGACTTTACATCATGATCATATGGTTAAAATTGATCATACTGCTCAGATCTCTTCTTCTTCCCGCCCTCCTCCTGTTGGAACTAAAAGAAGGTACTATTAATTTCTTTGTTCATTGATTTCTTTTATTTAGGTTACCAATAAACTGCTCGTAAACTTCTGAGTGCGTGTGTCTGAGAACCACCACGGCTTTATAAAGGTATTGATTGTAATTCAATGCATATTTTCTACAATTTTGTATAATTATACAATTTTTCTTTTTATCTTTGTAATGATGTATATTTTTTCTAAGGAAAAGTATAGCAAAGATCTTAACTAATAAGTGGATTTGTGGCATTTTTGTCAGATGAGATCTACAGTTCCCAAATGAGTATATCATTTATCTTTCTTTTATATCCGCCATGAAATTTTTTATTATAAAGAATTGGAGTCAGTTATTTATTTTTTGCATATAGCAACATTGCAATGAGAATATGCTTGAATAGGGATATGGATTTTGGGGAAAAGATAGCTTCCTTTTTCTTCTTCTTCTTTTTATTTCCCTTTTTAGACAGCCAAGCCACTAGAGTTTGTTGGCGTTTAATGCGCATGTGGCTTGCTACAAATCTGAAGTTCAAAGTTTAAAAATATAACACGCATACTATATATGTAAATAATATTAGATTTAGTTATCACTTTTTAATGAAATCGATCTCTTTCGTTTAAATTGCAATCCATATGTCTAAATCTTCAAATAAATATTGCATGATAAAAAAAAAATTGTAATTTTTCCATGAAATTCTAGCTAACATATAAAGCAAATATGAATGATGAAATAAAAAGCAGAAAGGGGCAAGGGAAAAAAGTGGTGTGTGTACCAGCACCGGCAGCAGCAAGCAGTAGATCAAGTGGAGAAGTGGTACCATCTGACCTTTGGGCTTGGAGGAAGTATGGCCAGAAACCTATTAAGGGTTCTCCTTATCCCAGGTAATCATTTCTATGTCATAATATTCTTCTCACCTTTTTCGCTTACCGTATTATCTTCAGAGTACAACTAGCATTAACCTGAAAAGAATATAAGTCTTATTGCATGCATAACAATCATCTTACAGTTATCATTGCTATACATTATACAAGTGAAGATTGTGATTCTTTTTCTCCACCATCCAAATTGAATTAATACAACAAAAAAGTGATTATACCTTATGTTACATAACAAAGGTTAATATTCCTCTATGATGTAGCAATAAACCAGTAAAGTAATAGAGCAACAATCTCCTACTCCAAAAAAGTTATGTTTCCATGTCCAATACAATCAAAACCTTCAATCAATTAATTAAGAAAAACAATTAATCTTTGCTATTCATAACAAATACTTATTTCATATGATTCAATGGTGTCTTTTGAAAGAAAGTATTATCTTCTTAAAGCTTCCACTACTCAATATTTTTTTTTTGTCAACTAAAACAAATACACAAAAATTTAACATTTCAACCAGAAATTTGCACATCAGCCATTATTATTTGATTTTCGCTATAATGTTCTATTTATTTATTGATTTACGTACATTTAACATTATGATAATAATTTTTTTATGTGCAAAATTACTTATTACTATTCTTTTAATCAAGTCCATATCTTTTGATAAAAATTAGTTACGTTATTATTTAACTTATAAAAATATATGTATGTATGTTTGTATATTGTCAATGCCCTTTTTAATGTTTATTTTATACTTGGATATAAATTTAGCAAGTTTAATTAAAATTAAATAAGAAAGCGACGTATATAGGCGCATATAGTAGTAGTACAAATATTTAATATGGATGGATTGGATTAAAAAGGCACAGTAGAGAACCAATCTTTGGGACAAAAGAATCCATTTGTCAAGGACCATAACTATCTCATGATGGGAAGCTTAGATTATTTATTTAACTTGATAATTACACGGTTAGGAAAATCGAGGAGTTGAACAAACACATTTAGTTACACTTAAAACAACTAATTCTTTTACCATTGTTATCCTGATCACTGGTATAAAATTTGATAACTTTTATTTTACAACTATATGAACATGGCATGTGGTGTACAAAACATTTACATGCTACTCAACTCAATATGCCAACAAACTGTAAAATTACAAACTGCATGTGAAATCACATCACATGTTTTGATTAAAATCAACTACGTTCTTCTAGAGATCAAAATGATTAAATATAATATTTGATCTAAAGGTCAAAATCAACGCAGATAAATCCACGGTGATTTGAACCAAGCTTTGAAATTCCGTTTTCCGTTTTCCGTTTCCGTTCCGGTCATTGGTAATTTTAAAATTTTCGGTTTCGTTCCGGAAATTTCGGAAGTTCCGTTTTAATTTTGATTTTCTAATTCCGGTATCTTTTTTGCTTTAATTTGCTATTTACGCTAATAAATATCCAAAACTGTCATAAATTTATAGTACATTTTTTACATTATATATAAAATACACTTTAATTAAAAAACCATTGTTTAAGATTCTATATTGTTTATTTGAGATTTTAAAATTTTTGTAAATTTCTGAACTTTTTATTATGATTCGATGTAAATTAACAAAAGTATAACAACTATTTTGTCCGTACACATAATTTTTTGTCCATTTATTTATTGTTCTGTTTAATTTGTTTTTCTTTTTTTAATTACCATATGTTTGTTGTATTTTTCTATAATTTTTTTCAATATTTGAAAAACAAATCCGGAATTTAGACCGGAACCGGAACTTTGATGTCCGGATTCCGTTCCGGTTATGAGCGGAACCGGAACGGATGACCGGAAAAACCGAAATTTCCTTGGAATTTTGAACCATGATTTGAACTGACTATGTGCTTACTAGAGTAAAAACTGAAATATATACTATATGCATTTCAAACAACAAACCTCATGAATAAAAAAAATGGTGCAGGGGATATTACAGATGCAGCAGCTCAAAAGGATGCTCCGCAAGAAAACAAGTAGAAAGAAGCAGAACCGACCCGAACATGCTAGTCATCACCTACACATCCGACCACAACCACCCTTGGCCTACTCAACGTAATGCACTTGCTGGCTCCACCCGATTCCAACCTTCCAAATCCAAAATCAACACCTCCGCCTCTTCCTCTTCTTCTAAAAAAGCTAGTAACAGCACAAAAGATAACCAGTCAGAAAAAAGTAACACTGATACTAAAACCGTCAACGTGAAAGAAGAACTGATACTAAATGAGCAAATTCCAATGGATAATGATTACACATTCAATCAAGATTTATATAACGACCCATTGATTAGTTCGTGCAGTCACACGGATGACTTCTTTGCGGATTTGGCAGAGCTGGAGAGTGACCCGATGAGCCTCATTTTTACAACACGGGATGATGAAGAAGATCAAAAAGGGAGTGATAAAGGATTGGCCGTTGATCCATTTGTTAACATGTTTGATTGGGGTAAAGGTTTATAATCATTTTTTTCAAAACATAGCAAAAGGTTGCATATAACGGTATTGCTATTGTTTAAACAAAGTGTCCTTAAAGCGCAAATGATCAACGATAATAGTGGTAAAGCAGTTGATAAGTTGGAACTTCATTTCATTTCACAACATAGCAAGAAACCACCTTAATTTTATAAAAGTGGAAATTCATTAAAGTAGGTAGGTTGAACTGATCAGAAATTAAGGTGGTTTTTTTGCTATGTGGGTGATCATGGGGATGGAGAGCTTTCTTGCTAATCAAAAGTTAGATAGTGCTTTTGGGGGGCACAAAAGTTGCGTTTAGACATTAAGTTCTTAAATTACTATGTTGTTAATTGACAAATAGGTTTGTATTATATATAAAAATAGGGTAATGTAATTTAGTTAGGGAAAGTGTTGGTAGAGTGGGAGCAAAGAGTGGAAGTAGACCCACAAAATTTGGAATATTGGAGCTATATATGGATGGGACACAAAGCTAAAGAACAGAAGCTTTCAATAGTTTAAGAATGCAGGTACTTGCATGTGTGGGATGTGACTGCATGAATAAGCAGCTTGCAATTCAAGTTGATCAATGATCGATGTAGATGTTCATAGGTATATTGAGTGTAACATTTGTTTTCATTTATTACTTGATGAGGCATGTCAATCTATTTATATTGTAACATAAGAAACCAAAAATGTTGTACAAATAAATATAAATATACACCTACTTTCTGACTGAAACTCATCAAGGACCTCAAGTATTTTTGGTACTTCAATATGTAATAATCTAGTACACAGCCG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010920047.1	2.0e-74	probable WRKY transcription factor 14
Swissprot	O64747.1	7.2e-53	WRKY DNA-binding protein 35
trEMBL	A0A6I9R3U9	1.4e-74	probable WRKY transcription factor 14

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G34830.1	56.89	7e-63	237	AtWRKY35;MEE24;WRKY35	WRKY DNA-binding protein 35

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G05364	AT2G34830.1	225	82	3	126	335	172	396	56.89	7e-63	237
AfisC5G05364	AT1G30650.1	244	100	4	125	361	174	413	54.51	2e-58	223
AfisC5G05364	AT4G01250.1	189	75	5	139	327	108	269	46.03	4e-38	155

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	170	227	89.1	1.6e-25

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005516	F	calmodulin binding
GO:0005634	C	nucleus
GO:0007263	P	nitric oxide mediated signal transduction
GO:0009555	P	pollen development
GO:0009626	P	plant-type hypersensitive response
GO:0009739	P	response to gibberellin
GO:0009793	P	embryo development ending in seed dormancy
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0010150	P	leaf senescence
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0043565	F	sequence-specific DNA binding
GO:0051607	P	defense response to virus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network