Detail information of AfisC5G06098


Location
GeneChrStartEndStrand
AfisC5G06098chr511222166641122265945-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008790766.18.6e-83squamosa promoter-binding-like protein 16
SwissprotQ0J0K1.16.3e-46Squamosa promoter-binding-like protein 18
trEMBLA0A8B7C3836.2e-83squamosa promoter-binding-like protein 16

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G50570.150.934e-45 178SPL13;SPL13ASquamosa promoter-binding protein-like (SBP domain) transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03110.11SBPDomain83156105.01.6e-30

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0046872Fmetal ion binding
GO:0006351Ptranscription, DNA-templated
GO:0009941Cchloroplast envelope
GO:0048653Panther development
GO:0050789Pregulation of biological process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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