result

Gene information

Detail information of AfisC6G00330

Location

Gene	Chr	Start	End	Strand
AfisC6G00330	chr6	45766245	45770245	-

Sequences

CDS

Protein

Gene

>AfisC6G00330
ATGCCTTCAACCGAAGAAGAAACCTTATCAACTACCATTTCAGAAGGCTCATCGGTAGAGGCAGTAATGCATGCTTTGAACTCCAAAAGACTATGCATTGACCAAAACATTGTTGGTAAAGAACTAGCACTTGAAGAGTTACATCTCCCTTTTGAAGGAAGCATTGTAGTCGAAATGGAATCAAAAGACATACACAATGACTTCAAGTTTTTCATGAAGGAGATGATCGAAGCAAGCTACAACAGTGGAGAAGAAGTTAAAGATGTGGCTAGGTTTGAAGAAATGCTGCAATGGTACTTGAGAATGAACGTGAAATGGACTCATGGGTATATTGTTAAGGCTTACGTCGATTTGTTTTTTGATTCAATAAATGGTAGTTCATTGGGTCATAGCAGTAGTAGCAGTGTGTCTATTACTTGTTCGTCATCTTCGTTTACTTGTCCTTCTTATTACTTTTCTTGCTTGAATGAGATTGATAATGCAGAAGAGGAGGATGGAAATGGTTAATTAAAAAGTTTGTTTGGAAATATCTTGAAGCGCTTTAGTTAGTTAAATATTGCCTGTATTTTTTTGTTGCTGCAATATTAGTTTATAATCATGTCAACTCAAGGTTCTATATATGTTGCACTATTTCATAAACAGGATCAGAACATCAAATTTGTGTTGCTAAAACATTCTTCTGAGTTAATTGGATAAACAAGTTTTTGATTCTTATAATCTTGATAGATGTTAAAAATTGTAGATGTTGCTTTAATGGCTCAAATTCGTGTTGTTTTAATGCCCAGGTTTTACTTGGACATATCAATTCCATAACAGATGGATTCATGATGAGATGAACTACTTTTTGGGATATCTATAACAGGTTCTTATCCTTATACCCTTTGGTTGAGTTTGATGTTTGTTTTTCCCCTCTTTCTCTCTCTTTACTTTGTTCCATAAATATTAAAAAGTACTTAAATTTTTAGTCAAACTTACATATGGTAAAAGATGATCTTATATTTGAATTTTTTGTTATAATCAGTATAATCAGTATATAACTGACAAAACTGCAAAGTTTATAATACAATATTGGTGAATCATAAGTGTTAAACCAATATACAACAAAAATAAATGGAGAAACTGACATGTTCACATTTACCTTGTGTTGTGTGCAACCAATGCTTATATTAGACAAATTTGCCTCCGCTTTTATTTCAATATGTAAACAGGAGCGAATTTGTCTACAGTAAATCTTGTACCCACGATCAATTTCCTTATAATGAAAGAAAACTCCCAAAAAAATAAATTCAGAAACACTAACATTTACATATAGCTCGTGTGACAATTCATAACATATGTAGCTTCAGAAATGGTTAGTAAAACAGTTGCACAACGTCACATTTACATGCTGAAATCAGAGTTTTAGTATATTTAGAATTCACGCTAAAATCCACAAATTAAAATTCAAAAAATTATACCTAATAATATATTTTTTTCCTTTGTGAAGATATGTAAGGACTAGTTTTCCACTTGATATTCTTGGTTGCTTTCCATGGGATGGCATCTACAAGGTAAATGACTAATCAATACTTTAAGAGGATACACACACACACACGATTAGTTTAACTAAGCACTTCCATATGTCAGGCGACTGGAATAAGTGAATGCACCCGATATATTGTATGGATACGCTTATATCGTACAAGAAACATCTTACAGTTCTTCAAGAAAATGGAGAAAGACATCTGAATCAATTATCTATTTACAAGGATAGTTAAGCTTATTACAGTCGAACTATATTGCACACACACTGCTGCGTGCATTTTCTACTACCTAGCAACAACTTTACCTCCATCCCAAGAAGGCAATACATGGATTGGGAGCTTGCGGTTAGGAGATTATAAGTATATTAACTTCAGAGAAATTGATTTTTGGACACGATACATTTCTTCCGCTTATTTTGCCATAGTGACTATGGCAACTGTGGGTGAGTGCGTGAGTTCTTTCTTTCTTGTGGTTCGAACTTTGCATCCTAAGAATGGATGTCATTGACATACATATAGATAAACTGAGAGTTTACATACTATAACCATTGTTCAATCTTTGCACCTCTCTTTTTTTCTACCCTTGATGCTCATACATTTGACCTCTCTAGGATATACATGTTAAATTACTTCTTGAATTGACTATATTGTATGCCTTTAAGTATTGAAACCAAGAACTCCGATTACACAACCAAACGTCTTACCATTGCCACTATTATTAGTGGTTATTGGCTATATGGGTTCAATTTCATTTCATATGATTATGTATCAATAAAATTTCATGGCTTTGTTTGCATGTAGGATATGGTGATATACACGCGGTGAATACTAGGGAGATGATATTCATAATGATATACATCTCATGTGATATGATTCTAGGAGCCTATTTGATCGGTAACATGATTGCACTGATAGTTAAGGGTTCGAAAACAGAAAGGTTTCGTGACAAAATGACTGAGATTATAAAATACATGAACAGAAATAAGCTGGGTAACGATATTAGGGCACAGATTAAAGAACATCTGTTGCTTCAGTACGAAAGTAACTATACCAAAGCTTGTGCACTGGAAGATATTCCTGTTGCAGTTCGATCAAAGGTAGTTTAAAAGTAAAACCAAAATCTACAAACAAGATACTGGTTACAGTCAAGAAAAAAATGTGTTAATATGATATAATACACTGTTAGTTGTGTTATATTACAGACAATGAGAAATTTTCTCCTACCTAAATTTAATTTGTATAACTGAAATTTTGTCTTTGATTTTGTACAGATATCTCAGATGCTGTACAACGAGCTGGTTCAAAAAGTGCCCCTATTCAAAGGATGTTCCGAAGAATTCCTTAATCAAATTGTACATTAAATGATAGCAACAAATTTTTTAACCTTCTATTTTTTTTACAAGATTTCCCACCTTTTTATGCAAGCTAACCAACTTTGGTTTTATATTACTGCAGGTAATGAAATTGAATGAAGAATTTTTTCTACCTGGGGAAGTCATTCTTGAACAAGGGTGTGCAGTGGATCAAATTTACATCGTATCGAGTGGGCATTTGGTAAATAACATTATAACTAGAGAGAAAAATGTATGAACATGTAAATAGACATATTTGAAAATAATTATCCAACAATTGATCAACTTACTTGTAGGAGGAAGTAGTCGCTGGGGAAGATGGATCAGAAGAATCAATAGCAGAGCTCATGACATACGATATATTTGGTGAAGTTGCAGTTCTATGTAACATTCCACAGCCATACACCGTTCGTGTCTGTGAATTGTGTCGACTTCTACGCATGGAAAAACAAGCCCTGACAAGTATATTACAGCTTTATTTTAGAGACAGTCGACAAATACTCAGTAATTTACTAAAGGTATTGCCACAACATGTACATTAAATTACAAAATGATAGAGTAAAGAACAAAACTGATAGAAGAAGAAATTATTTTTTCAGGAGAAGGAAACAGATTTAAGAATCAAGCAACTAGAGTTGGATATTACATATTTAATCGCAAAGCAAGAAGCTGAACTGGCAATAGGAGTAAACAGTGCTGCATATCATGGAGATGTGTACCATCTCAAAGGATTAATTAATGTTGGTGCAGATCCTAACAAAACTGATTATGATGGAAGGACAGCTTTGGTAACTTCTCATAACTTCAAGTATTTTATAATTTACTTGGTCTACCATAAGATTTTTTATTAAACCAAGGTTAAAAAGAAGAGACTGAATCATACACATGCATACATTTAATGTATAACTACCAATTATGAACAACAATGCTCCTACTAATACATGACGTATTATAAGTTAGAAATCATATTAATACTATTTTCTATTTACTTGGTCTGGTTGATTTGCTGATGAACTGGAAGAGTTTGTAGATGGAGCTGGTGGAAGCGAAGCTGCTTGTTTCAGTTTGTAAATGGTGTAAGAGTTCAAGCAATTTGCTTGACGGGTATGGTGCGGCTTTGGTTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK57795.1	2.4e-184	uncharacterized protein A4U43_C09F4170
Swissprot	Q7XUW4.2	8.2e-158	K(+) outward-rectifying channel 2
trEMBL	A0A5P1E8H8	1.7e-184	Potassium channel

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G02850.1	61.95	4e-159	558	SKOR	STELAR K+ outward rectifier

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G00330	AT3G02850.1	431	120	1	204	590	155	585	61.95	4e-159	558
AfisC6G00330	AT5G37500.1	431	135	1	204	590	138	568	58.47	1e-151	533
AfisC6G00330	AT2G26650.1	377	222	6	220	590	188	555	37.14	9e-64	241

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04844.10	Ovate	Family	61	120	52.5	3.4e-14
PF00520.28	Ion_trans	Family	225	334	41.3	9.4e-11
PF00027.26	cNMP_binding	Domain	428	512	59.2	2.7e-16

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0005783	C	endoplasmic reticulum
GO:0005887	C	integral component of plasma membrane
GO:0005242	F	inward rectifier potassium channel activity
GO:0005634	C	nucleus
GO:0009536	C	plastid
GO:0009624	P	response to nematode
GO:0009737	P	response to abscisic acid
GO:0010163	P	high-affinity potassium ion import
GO:0015271	F	outward rectifier potassium channel activity
GO:0030551	F	cyclic nucleotide binding
GO:0034765	P	regulation of ion transmembrane transport
GO:0042391	P	regulation of membrane potential
GO:0055075	P	potassium ion homeostasis

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K21867	AKT, KAT, GORK, SKOR; potassium channel	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network