result

Gene information

Detail information of AfisC6G01762

Location

Gene	Chr	Start	End	Strand
AfisC6G01762	chr6	289884104	289885477	-

Sequences

CDS

Protein

Gene

>AfisC6G01762
TATTAAATTGTACAACACTGTACACGAATTGAGGAGGAAATTGTCCACTGAAAATTCATTTTCTGATAAAAATCGCTTTCATTGCAAAACAACGAACTTCTTTTTCTATAAATTTCAGTCTTTCTGACATCTTCTTCTCAATCATCCAAGTTAAAACTTTTGATATGGGAAAAAAAAATCATCAAATCAAATCATAATTAAATGTCAATGCTAAACCCTAAGCGCCCAAATCGGCGCCGATTGAACCTAGCCTTACCTCTCCCACCCCACGATTCTTCTCCCTACGTCCCTCTCCCTCTCCCTCTCCCTCTTCCCCCTCCTCCTGCCATGTCTTCATCAACAGCATCTCATACCGCCGCCAACACTCCTTCCTTATCCGACCTCGATCGCGAACGCCTTCTCGGTTCCGGTGCCGGCGGCACCGTCTGGCTAGTTAGCCACCGACCCACCAACCTGCTCTACGCTTTAAAACTCCTCCACAACCAACACGATGACGCCGTCCGTCTTCAGATCCGCCGAGAAATCGAAATCCTACGTGCAGTCCAAAATCCCTTCGTCGTCCCCTGCCACGCCATGTTCGATCACGGCGGCCAGATCCAGATCTTGCTCGAGTACATGGATTGCGGATCCTTGGAAAATCGCCATATCACCAACGAACCGTTTCTGTCTCACATAGCGAAGCAAGTCCTCTCCGGACTCGCGTACCTTCACCGTCACAGAATAGTTCATCGCGACATCAAGCCATCGAATCTGCTGATCAATACCAAACATCAGGTCAAGATCGCTGACTTTGGCGTGGGTAGGATCCTTGCGTGTACGATAGATCCATGTAAGTCGAGCGTGGGGACTGTTTCTTACATGAGTCCGGAGAGGATCAACACGGATTTGAACGATGGAGTATATGATGGATATGCAGGGGATATATGGAGCTTTGGATTGAGTATGCTTGAATTTTACATGGGGAAGTTTCCATATGGAGAGCAACTGAGAGGGCAGGAGGGTTGGGCGAGTTTGATGTGTGCGATTTGCTTCTCGAACCCGCCGCAGGCGCCGGTTTCAGCTTCTGATGATTTTAGGAGCTTTATTGGTTGTTGTTTGCAGATGGAGCCAAATAGAAGGCGTACTGCACAGCAGCTGCTGCAGCATCCGTTTATTACTCAGACTCAGCAGATGATATGATGCTGTCTGTATCCATGTCATCATGAAAGGCTTTTATGGGTGCAAACGCATGGTACATGTAAATGTTATTTCCTTGTAGTCTAGTACAGTCAGATCTTTCAGTTGTATAATTATATGTATATATATATATTATTATATATATTATATAATGGAAATATGTTGGGATAAATTTTTTTGTTATATCCATTTTTCATC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008808344.1	5.7e-113	mitogen-activated protein kinase kinase 5-like
Swissprot	Q8RXG3.2	2.6e-99	Mitogen-activated protein kinase kinase 5
trEMBL	A0A8B7CXM9	4.1e-113	mitogen-activated protein kinase kinase 5-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G51660.1	59.75	4e-103	371	ATMEK4;ATMKK4;MKK4	mitogen-activated protein kinase kinase 4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G01762	AT1G51660.1	318	116	2	11	318	19	334	59.75	4e-103	371
AfisC6G01762	AT3G21220.1	265	92	1	57	321	66	328	64.53	2e-100	362
AfisC6G01762	AT1G73500.1	315	150	5	10	320	6	308	47.30	2e-73	272

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	63	318	196.8	3.8e-58

Gene Ontology

Accession	Ontology	Name
GO:0000187	P	activation of MAPK activity
GO:0005515	F	protein binding
GO:0002229	P	defense response to oomycetes
GO:0016020	C	membrane
GO:0004707	F	MAP kinase activity
GO:0004708	F	MAP kinase kinase activity
GO:0005634	C	nucleus
GO:0005856	C	cytoskeleton
GO:0007112	P	male meiosis cytokinesis
GO:0012501	P	programmed cell death
GO:0009524	C	phragmoplast
GO:0009570	C	chloroplast stroma
GO:0009611	P	response to wounding
GO:0009620	P	response to fungus
GO:0009651	P	response to salt stress
GO:0009693	P	ethylene biosynthetic process
GO:0009862	P	systemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864	P	induced systemic resistance, jasmonic acid mediated signaling pathway
GO:0009866	P	induced systemic resistance, ethylene mediated signaling pathway
GO:0009926	P	auxin polar transport
GO:0010120	P	camalexin biosynthetic process
GO:0010150	P	leaf senescence
GO:0010227	P	floral organ abscission
GO:0010229	P	inflorescence development
GO:0010311	P	lateral root formation
GO:0010605	P	negative regulation of macromolecule metabolic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0033554	P	cellular response to stress
GO:0030295	F	protein kinase activator activity
GO:0046777	P	protein autophosphorylation
GO:0048513	P	animal organ development
GO:0048523	P	negative regulation of cellular process
GO:2000037	P	regulation of stomatal complex patterning
GO:2000038	P	regulation of stomatal complex development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13413	MKK4_5; mitogen-activated protein kinase kinase 4/5	EC:2.7.12.2	MAPK signaling pathway - plant	ko04016
			Plant hormone signal transduction	ko04075
			Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network