result

Gene information

Detail information of AfisC6G03662

Location

Gene	Chr	Start	End	Strand
AfisC6G03662	chr6	664863499	664864553	-

Sequences

CDS

Protein

Gene

>AfisC6G03662
CGTAGGTTCCTATACATCTACTTTTGGCTACCGTTGTCTATTGGCCTCTTTTGCCTAAATATTTATTCTGTAAGATCGTTGCCTTAAATAGTCCTCAAATTGCTGTTTGAGCTGATTGAACCCTTGCCAAATTTAACTTATGATGTGATATGTGTATTTCGTATGGATCCAGTGGTCTATTTATCAAAAGTTGGAAGTGTAGATTAAACAAATAGTCAAATCATACAGTTATTTTTTCATTAAATAAAATACTACATTGCTAAGCAAACAAAGGAGTAAGATGAGTCCTAGCGATTGGAGTTGGGAAGAGAATAAAGCATTCGAGATGGCTTTAGCTGTGATCGAAGAAGACGACCCTGAAAAATGGAAGAAAATCGCTTCGGCTATTGGAGGAAAGAGAAGCGTAGATGAGGTCGAGAAACAGTATTTGAAACTGTTGAAGGATTTAGATTTGATTGAATCAGGTGCAATTAATCATGAATTCATGGGTATGGATGATTGCTGCAAAGGCGTTGATTGCATAAAGAAGAATAATCACAGGTAAGTTTGTTCTTTAATTGTGGTAGTTGAACAGATATAATATTGATCTTGTTTGTTTTATACCGATTCTAACTTATTTGTAAAGGTGAGAGGAACATTAAGATCCTGAAATTATACTTTGTATGTAAGAATACTGAAAGAAGAAAATAAATAACAACTTCATTTGTGAATTTTGAAGAAGATGTTTATGCTACTATGACACGAATTAGTCATCGAATTTCGTATTAAATTTATGAAAAATTATTGCAGGTTGCTCTTGCAGCTGAGAATGGATGAAGATTGCTGCTCACCAATTACGCGGATTCTGGGCTCATCGAAATTGTAGGATCTAATCAACGAACTTATTAGTTTTGTTGATGATTAATTAAGTGAATATTTCTTATAATATATACAGTGGTCATGTATTTGTCCAATTTATTCAAGTCATAACATCTGGAGTAAATTCTGTAGTCCTAGTGTTTTTATTCTGTGTTAACGTAAGTGGTGCCTATCCTGTGCTTATGTACATAGTTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_011005948.1	1.1e-18	PREDICTED: protein RADIALIS-like 4
Swissprot	Q1G3C4.1	1.3e-10	Protein RADIALIS-like 4
trEMBL	A0A2K1XU03	1.3e-18	Myb-like domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G75250.1	46.03	4e-11	63.2	ATRL6;RL6;RSM3	RAD-like 6

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G03662	AT1G75250.1	63	33	1	2	64	8	69	46.03	4e-11	63.2
AfisC6G03662	AT1G75250.2	63	33	1	2	64	8	69	46.03	6e-11	62.4
AfisC6G03662	AT2G21650.1	59	32	1	6	64	14	71	44.07	8e-11	62.0

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
-	-	-	-	-	-	-

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009630	P	gravitropism
GO:0009793	P	embryo development ending in seed dormancy
GO:0009908	P	flower development
GO:0010114	P	response to red light
GO:0048262	P	determination of dorsal/ventral asymmetry

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network