Gene information

Detail information of AfisC6G04281

Location

Gene	Chr	Start	End	Strand
AfisC6G04281	chr6	764796737	764797489	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	KAA8522454.1	5.1e-47	hypothetical protein F0562_013185
Swissprot	Q9FFS3.1	2.1e-42	WRKY DNA-binding protein 24
trEMBL	A0A5J4ZX26	3.7e-47	WRKY domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G46130.1	73.15	4e-45	177	ATWRKY43;WRKY43	WRKY DNA-binding protein 43

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G04281	AT2G46130.1	108	29	72	179	1	108	73.15	4e-45	177
AfisC6G04281	AT5G41570.1	106	28	74	179	71	176	73.58	4e-45	177
AfisC6G04281	AT1G64000.1	102	26	78	179	91	192	74.51	1e-44	175

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	101	158	90.8	4.6e-26

Gene Ontology

Accession	Ontology	Name
GO:0000122	P	negative regulation of transcription from RNA polymerase II promoter
GO:0001046	F	core promoter sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0006817	P	phosphate ion transport
GO:0008134	F	transcription factor binding
GO:0009414	P	response to water deprivation
GO:0009611	P	response to wounding
GO:0009624	P	response to nematode
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009867	P	jasmonic acid mediated signaling pathway
GO:0009961	P	response to 1-aminocyclopropane-1-carboxylic acid
GO:0010055	P	atrichoblast differentiation
GO:0010200	P	response to chitin
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0032107	P	regulation of response to nutrient levels
GO:0043620	P	regulation of DNA-templated transcription in response to stress
GO:0048527	P	lateral root development
GO:0051607	P	defense response to virus
GO:0070301	P	cellular response to hydrogen peroxide
GO:1901002	P	positive regulation of response to salt stress
GO:1901141	P	regulation of lignin biosynthetic process
GO:1904369	P	positive regulation of sclerenchyma cell differentiation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network