result

Gene information

Detail information of AfisC6G04632

Location

Gene	Chr	Start	End	Strand
AfisC6G04632	chr6	833020341	833021546	-

Sequences

CDS

Protein

Gene

>AfisC6G04632
CTAACCTTCCAGGAGAGTTCTTACCAAATACAAAACACATATAAAGGGTGCGCATTATGAAGATACTCTTCAGTTGAGTAGTCGAGCTATAGAATATAGAAATGGAAGCAATCGATGAATTGACAAAAGGACTAGATGGGGCGACTGAACTCCGGGGTCTTCTTGATGCAATCTCGAGCCCTTTATGCAACTTATGTGATGAAGTCATTGCTACTCTACAAAATGGTATTTCGCTTCTGAAGACTTTGGACAACGAGACACCATTATTGAGGTTAGCTTTGTCATTTCATAGCACCCTAATGATCAGAAATCTGTCAATTTATATAGAAATTTAAGATGACATATTTCTATATTAATTTAGCAGTAGCAAGCAGAACATAAATAAAGTGACAATCACAACTTCGCCCTTCAGCGATGGTTATAAGTGGAGGAAATACGGGAAGAAGACAATTGGAAACTCAATATATCAAAGGTTTTTATGAATATGTATTGTATTATGCAACTAATATATCACATGATTTATATATATATATATATATATATATATATATATATATATATATATATCTTAAATAATAACAACGAGGACGACGATGATAGATATAATGCTATATATACTTGCTGATCATAAATAGTAGCTAATATATTGATGTAGAAGCTACTACCGGTGCAACTCGGATAAATGCAACGGGAAAATACAAGTTCGGCAAGTCAATTGTAAAGAGTCTCCAGAATATGAAGTTATTTCTACAAATGAGCATACATGCGACATAGTTCAACATAATCCACTACTTCCTCCTAGAAATGTTGAAGAGTTAGACAGATCAAGATTGGAGAGAGCATTGGGAAATGAAGTAGCTTCAAGCCCTGAACCGATGACTGATCAGCCTCCAGAAATTGCTGACTTAGATTTTTCATGGGATGAACAGGCTTTGAATGAACTTATGTCCATCGTTGATTAAGATTTTTATTATTTTTATTGAAATGATTGAAACGCATATTTGAGGTGGAGCCTTGGTGCAACAGTTATGTCACCCGCATAGTGATTTGAACGTTCGGGTTCGAGTTCAGAAGCAGCCTCTTCGCAATGCGAAAGAAAAACTGCATGCAGTATTGACCTCTTCAGAACCCGCTATTATGCGAGAGCCTTGCACTACGTTCCACCTTCCTTATTGAAACGCATGTTTGCACCCTTGATTGATGGAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_025818129.1	4.6e-09	probable WRKY transcription factor 64
Swissprot	Q8GY11.1	4.9e-08	WRKY DNA-binding protein 43
trEMBL	A0A2S3HQJ0	3.3e-09	WRKY domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G46130.1	47.54	1e-09	60.1	ATWRKY43;WRKY43	WRKY DNA-binding protein 43

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G04632	AT2G46130.1	61	27	2	74	131	31	89	47.54	1e-09	60.1
AfisC6G04632	AT5G46350.1	65	28	1	74	130	184	248	44.62	2e-09	58.9
AfisC6G04632	AT5G01900.1	114	70	3	56	166	93	199	29.82	2e-09	58.5

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	74	131	57.3	1.3e-15

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0008270	F	zinc ion binding
GO:0009863	P	salicylic acid mediated signaling pathway
GO:0009867	P	jasmonic acid mediated signaling pathway
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network