Detail information of AfisC6G05792


Location
GeneChrStartEndStrand
AfisC6G05792chr610175193031017526179+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020269644.19.2e-51histone deacetylase HDT2-like
SwissprotQ9M4U5.16.6e-46Zm-HD2b
trEMBLA0A8B7CPW69.9e-47histone deacetylase HDT2-like isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G03740.139.673e-38 155HD2C;HDT3histone deacetylase 2C

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
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Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding
GO:0005730Cnucleolus
GO:0006351Ptranscription, DNA-templated
GO:0009294PDNA mediated transformation
GO:0009944Ppolarity specification of adaxial/abaxial axis
GO:0010162Pseed dormancy process
GO:0016787Fhydrolase activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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