Detail information of AfisC6G05859
| Gene | Chr | Start | End | Strand |
|---|
| AfisC6G05859 | chr6 | 1028453949 | 1028485858 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020267197.1 | 6.8e-111 | transcription elongation factor TFIIS-like |
| Swissprot | Q9ZVH8.1 | 2.3e-87 | Protein REDUCED DORMANCY 2 |
| trEMBL | A0A5P1EPL2 | 4.9e-111 | Transcription elongation factor |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT2G38560.1 | 66.67 | 3e-71 | 265 | RDO2;TFIIS | transcript elongation factor IIS |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC6G05859 | AT2G38560.1 | 186 | 55 | 1 | 134 | 319 | 200 | 378 | 66.67 | 3e-71 | 265 |
| AfisC6G05859 | AT2G38560.1 | 109 | 47 | 1 | 1 | 106 | 1 | 109 | 54.13 | 3e-19 | 92.8 |
| AfisC6G05859 | AT4G18720.1 | 248 | 122 | 4 | 3 | 248 | 4 | 215 | 35.48 | 5e-32 | 135 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF08711.8 | Med26 | Domain | 34 | 83 | 46.3 | 3e-12 |
| PF07500.11 | TFIIS_M | Domain | 142 | 266 | 104.7 | 3.1e-30 |
| PF01096.15 | TFIIS_C | Domain | 279 | 317 | 68.3 | 3.3e-19 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K03145 | TFIIS; transcription elongation factor S-II | EC:- | - | - |