Detail information of AfisC6G05876


Location
GeneChrStartEndStrand
AfisC6G05876chr610330102231033022120-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrTYH92362.13.2e-92hypothetical protein ES332_A13G177200v1
SwissprotO04017.12.8e-80NAC domain-containing protein CUC2
trEMBLA0A8K0MZ251.4e-92Protein CUP-SHAPED COTYLEDON 2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G53950.147.913e-83 305ANAC098;ATCUC2;CUC2NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

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Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily17144100.65.8e-29

Gene Ontology
AccessionOntologyName
GO:0000975Fregulatory region DNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0009414Presponse to water deprivation
GO:0009611Presponse to wounding
GO:0009651Presponse to salt stress
GO:0009723Presponse to ethylene
GO:0009733Presponse to auxin
GO:0009737Presponse to abscisic acid
GO:0009834Pplant-type secondary cell wall biogenesis
GO:0009867Pjasmonic acid mediated signaling pathway
GO:0010029Pregulation of seed germination
GO:0010072Pprimary shoot apical meristem specification
GO:0010199Porgan boundary specification between lateral organs and the meristem
GO:0010223Psecondary shoot formation
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0042542Presponse to hydrogen peroxide
GO:0042803Fprotein homodimerization activity
GO:0043068Ppositive regulation of programmed cell death
GO:0043565Fsequence-specific DNA binding
GO:0046982Fprotein heterodimerization activity
GO:0048467Pgynoecium development
GO:0048527Plateral root development
GO:0048829Proot cap development
GO:0051091Ppositive regulation of sequence-specific DNA binding transcription factor activity
GO:0051782Pnegative regulation of cell division
GO:0090400Pstress-induced premature senescence
GO:1900057Ppositive regulation of leaf senescence
GO:1902074Presponse to salt
GO:1903648Ppositive regulation of chlorophyll catabolic process
GO:1904250Ppositive regulation of age-related resistance
GO:0090709

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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