result

Gene information

Detail information of AfisC6G06429

Location

Gene	Chr	Start	End	Strand
AfisC6G06429	chr6	1126189095	1126194124	+

Sequences

CDS

>AfisC6G06429
ATGAATACACCAAGACCGAAGCGCATTGTAGGGAAGTATGAACTTGGTAGAACAATTGGAGTAGGAACATTCGCAAAAGTTCGATTCGCAAGAAACATTGAAACAGGAGAACATGTTGCAATCAAGATTCTTGATAAGCAGAAAGTTCTCAAACACAAATTGGTTGATCAGATTCAGCGCGAAATTGCTACGATGAAGTTAATAAAACATCCCAATATTGTTCGCCTACATGAGGTAATGGGGAGTAGAACAAAGATATTTATTGTTCTTGAATATGTTACAGGAGGAGAGCTGTTTGACAAAATTGTTAATCATGGCCGAATGAACGAGGATGAAGCTCGGAGGTATTTTCACCAACTAATCAATGCAATTGATTTTTGCCATAGCAGAGGAGTGTATCACCGCGATTTAAAGCCTGAAAACTTACTGCTCGACGCATTTGGTATTCTCAAAATTTCGGATTTTGGGCTTAGTGCACTTTCTCATCAAGTCAGGGAAGACGGCCTTCTCCATACTTCATGTGGCACTCCAAATTATGTTGCTCCTGAAGTGCTTAATGATGGAGGTTATGATGGAGCAGCTGCAGATTTATGGTCTTGTGGTGTTATTTTATATGTATTACTCACTGGTTGCTTGCCTTTTGATGATTCTAACCTCATGAGATTGTATGAGAAGATTTCAAATGCAGAGTTTACGATCCCTTCTTGGTTTTCTAGTGGAGCAGAAAACTTGCTGAAGAGAATTTTAGATCCTAATCCAATGACGAGAATTACCATTGGGGAAATATTGAAGGATAAGTGGTTTAAGAAAGGTTACAAACGCCCTGCTTTTGACGACAAGTACAATACAAACCTGGATGATGTAGCTGCTGCTTTCAAGGACTCGGAAGATTCTACTTCGGATGTTGAAGATGCAAAACCTGCAAGTATGAATGCGTTTGAATTGATCTGCTCAATGTCCAAAGGAATGGACCTGGGAAACTTGTTCGAAACGAAACAGGAATTTAAAACAGAGATGAAATTCACATCAAAGTATTCTGCCAATGAAATTACAAGCAAGATTGAGGAGGCTGCAAAGCCACTTGGCTTTGATATTCAAAAGAAAAACTACAAGATGAGACTGCAAAATTCTACTGAAGGGAGGAAAGGAAATCTTAATGTTGCAACTGAGATACGTCAAGTGGCACCTTCTTTCCATATGGTTGAGCTTAAGAAATCTAAGGGAGACACCCTAGAGTTCCAAAATTTTTACCAGAAGCTATCGGCTGGCCTGAAGGATGTAGTGTGGAAAACCGAAGAGGACATGGAAGCTCATTTTCGTGGAAGATGA

Protein

Gene

>AfisC6G06429
GTCAGTTATTAACATTCCATTATTCCGATTTAAAGTCATTTTCTGGTAACTGTAAAAAATTGAATCAAACGCCAACAGAAATAAGAAGCTTATAAAAGAGCTACCTTTTCCATTGTTTTTTCTGCAGCACCGCTCTACTTTTCGTTTCTCTCTCTATAAATTATCTCAGATTTGTGAACATTCACACTGGCATTTGAAGAAAAGTCTCTGTGTTTGAACAAAGGTACGATCTTTATTTCTGATCGATGAATTTTCGTTTTTTTTTCTTTATTTTTTCTACAATACGGATATCAGTAGAAATTTGTTTGTTGAGCTGGGTTTTGAATATGACCTGTTTTTGTGAAATTTGTGCGTTTATATTTTATTTGACAATGTTAGTTTTGCTCTGAACTAATTGGTAAAGCTTGTAAATTAGGTTGAGATATATTCTAGTTTGATTTAATATAAGTTTTTTTTAAAAAAATATCTTTGTATCAAATCAACTCCGAATTATGGTCTTTATTGCATGCATTTAAACTTCAAAGAAGTTTCTTCTCTTTATTAAAAGGCTTTTAAATTGGAGTTGAGAAGTTTCATTCAGAAAATTTATGATCTGCTTGAATAATGTTTGATTGAATTGTGAAGGTAGGTTAACTCTTGTTGGTTCTAAGATTTTTTATTCATGCTACAAAATCTTAATCTTGCCATTTTAATATGGTAAATCCTTATCAGGATGCCCTGGTGATTTGTATTAGTTTTATAGTTGGCTTTATCCTCCTAAATAAAAAGTTTAAAACTTTAAAGCAACAACCCATAGTTCACTTCTTCTAAACATTTATTTAATCACTAAAAACCCCACAAAAAGAGGAAGCTGATTTTAGTTTGTTGATATACAAATGAATTTTTGTACTTCCATATGGTATTCTTAACTCTGAATTTTTGTTTTTGTTAAAATTTCATTTTCAATCATTCTTATCTAACTATTTTTTGGTGAAATAGTATCTAAAGAGAAGTCACCATGAATACACCAAGACCGAAGCGCATTGTAGGGAAGTATGAACTTGGTAGAACAATTGGAGTAGGAACATTCGCAAAAGTTCGATTCGCAAGAAACATTGAAACAGGAGAACATGTTGCAATCAAGATTCTTGATAAGCAGAAAGTTCTCAAACACAAATTGGTTGATCAGGTTTAAATCAAATACTAACCATCATATCTCATGCATCTTCATTTTACTTTCTGGAATTGCATGCGTTCACCATCTTATCTATTTTTATAACAATAGAAAACTGAATTATTTTATGTGAATTTTGGTGCAGATTCAGCGCGAAATTGCTACGATGAAGTTAATAAAACATCCCAATATTGTTCGCCTACATGAGGTATAATCTGAGGCCATTGCTAAGATATTATTTTATTGCATCTAGCCTTACATCATGTTATGCACATTGTCAAAAAACATTGTTTGTTATTACAAGAAAACATTCAAGTCATATTTGAATTGTGTCAAGTTAGGCCTGTTTCTTTGTCATGACTACGTATGCCCCATTCTTAAAATATTTTACTTTTTGCAGGTAATGGGGAGTAGAACAAAGATATTTATTGTTCTTGAATATGTTACAGGAGGAGAGCTGTTTGACAAAATTGTAAGCTACCAATTCTAAAACAATTTACTCGCTATCATTTTTAAGTGAGAGTAAAATGTATAACGTAACAGAAAATTATTTTCCAACTATGTAGGTTAATCATGGCCGAATGAACGAGGATGAAGCTCGGAGGTATTTTCACCAACTAATCAATGCAATTGATTTTTGCCATAGCAGAGGAGTGTATCACCGCGATTTAAAGGTGAAAATTGTGCCAAATATTCAGTTTTATTATATAAACGTAAGAATGCATAATTAAGTTTATTTTACTTTTTTTGCAGCCTGAAAACTTACTGCTCGACGCATTTGGTATTCTCAAAATTTCGGATTTTGGGCTTAGTGCACTTTCTCATCAAGTCAGGGTAATAATTCAAGTAAACTTAAGTTACAATTCAACATATTCCTCTCTCTTTTACCATAAATTTATGTATGCAACTATTTTTTTAAAATAGGAAGACGGCCTTCTCCATACTTCATGTGGCACTCCAAATTATGTTGCTCCTGAAGTGCTTAATGATGGAGGTTATGATGGAGCAGCTGCAGATTTATGGTCTTGTGGTGTTATTTTATATGTATTACTCACTGGTTGCTTGCCTTTTGATGATTCTAACCTCATGAGATTGTATGAGAAGGTGAGAAATTATGCATGTTTGAAGCACTTAGTCTCAGTTCCTTCTGTTAAAATAGTTAGCTAATGAATTTCATTGCAACATGCAGATTTCAAATGCAGAGTTTACGATCCCTTCTTGGTTTTCTAGTGGAGCAGAAAACTTGCTGAAGAGAATTTTAGATCCTAATCCAATGACGGTCAGTATCCCACATATATCTGGAATATTTCCCATTTTAGCCTATTTTAGAAAAAAATATACATTTAAAGTACTTTGTAAACCATTTTTAAAAAACCAACTTTCGCAAATGTCGCAATTTTAGTGGGTTAAAGATGGTGCTAAGACATTATTTTTATTTTTGGAAAAAGTTACTGATATTATTTGAAACACACAAGACACACACACCCACACCCACACCCACACACACACATATACATATATATATATATATACATATATATATATACATACATATATATATATATATATATTATATATTAAATGTACTCTCTAAAACCCTCATATGAAACGTTACTTTTGTTATGCAGGCAAAAATAACATGTTTTTTTGATTTAAAATATGAAATATGTTTTTGAAAGTGGTCGAAATGAGTAAAATGTGTCCTATACCTATATGTGCATGCTATATGTTTTTTTTCCCCATATCATTGTCATTAAACTTCTTACTATCATATGCAGAGAATTACCATTGGGGAAATATTGAAGGATAAGTGGTTTAAGAAAGGTTACAAACGCCCTGCTTTTGACGACAAGTACAATACAAACCTGGATGATGTAGCTGCTGCTTTCAAGGACTCGGAAGTGAGTCATTTTTTGTTATTAACATTGCTTACTTTTCTAGTTTTGGTTGTAGTAAGTCTTTCAGTATTAATTTTAAGTTCTTTGTTAGGATTCTACTTCGGATGTTGAAGATGCAAAACCTGCAAGTATGAATGCGTTTGAATTGATCTGCTCAATGTCCAAAGGAATGGACCTGGGAAACTTGTTCGAAACGAAACAGGTATAATCAAAATTTTCAAAATGGGATTCAAATTGTAGATCGTAAAGTTTCAAAATTTTAATTTATTTGAATCTTTGATCTTAGATCTAAAAGAATTATATATATTGATGAGCATCATATATGTGTACTAGAAATTTTGCTCTATGTAGGTTATTAGATGGCATTAAAGTATGTGAAAACATTGATTGTTTTCCCATATGAATAATTTATATCTTGAATTGATTTTTACGATTGAGCTTGTGCATGTAAATCTAAAATCAAGTTTTTTCATCTTATGTCGCATCTTTATTTTGTTTATTAAACAATAAAAATTGGAATTGTGGATTCAAATATGAACATGGATTGAATGATTTTTCACAGTTTTAATAGAGCTCTAGCTAACATTTGAAAATCCAAACACAATAGAAGAGATTCGATTTAAAATGGAATTCAAATGCAAGCTTTCAATAACAATGATATTGTTGATGCTTAGATACAAGCATATATTATATTGTCCTTTGATAACAAAAGTGATATTTATATTCAAGTAGAGCACTCATCGTGATGACTTTAGAGCTCGAACCCACAACCCCTAAACATTTGTCTGAAATGACGTACATTTAACCACTTGGGCTAGAAGTCGTTGACATAATTAATATCGCAAAGGAATTGAATGACACACTGACATGGTTACCCCATCGATCTAATGTCATATTGCATACAAAATCTCTAGTCATCTTCAGCAAGTGTACTTGTTATGATATAATACGTCCGATATATGCGTTCATGGGCTTCCCATTTACAATCCATTTTTCATTTGTTGCAGGAATTTAAAACAGAGATGAAATTCACATCAAAGTATTCTGCCAATGAAATTACAAGCAAGATTGAGGAGGCTGCAAAGCCACTTGGCTTTGATATTCAAAAGAAAAACTACAAGGTAGAAAATATGCCTTACACTTTATAAGATGATACACGGACATATTTGATACATTGTTGCCTACTGTATTGCTGACTTACCATTTTTTTTTCTTTTTCTTGGTAGATGAGACTGCAAAATTCTACTGAAGGGAGGAAAGGAAATCTTAATGTTGCAACTGAGGTATGCACAAAACTTTTTCTTTTTTTTTTCAAAATGTGAACACAAACAAATTTGAATGTGTGAACAGTTCTTACTACAGATTCAAATTTACTTCTGAACTATGCAGATAATACATCATTTTATGAACTACAACCTTTTTTGAAACATGCAGATACGTCAAGTGGCACCTTCTTTCCATATGGTTGAGCTTAAGAAATCTAAGGGAGACACCCTAGAGTTCCAAAATGTATTGTTGCTAATTCTTTTAGCCAAATCTGTATACTTCATTTCAACAGTAATACATATAGTTCAGTAAATGATCTTATAAATTATACTTTTGCAGTTTTACCAGAAGCTATCGGCTGGCCTGAAGGATGTAGTGTGGAAAACCGAAGAGGACATGGAAGCTCATTTTCGTGGAAGATGAGTTAAAGCTTTGTAATGAGCATAATGTGATAGGTTCTCCAGTTTCTGTTTCTAGCAGGGGTTTAAGTTAGCTGGTCCGGTCATTTGTTTATTTGTTCGTTTGTTGTCCCTTGTAAATCTTGAAACCTTTTCAATGGCATCTTTAGTTTCAAGAAGAAGAGTAAAATTAATAAAAAAAATTAAAAAGAACATGTTACAGCTTATGTGTTGGCGATTATACTGTATGATTTCATGCTTCTGCGAACTATTTTCATTCTATCAGAGCATCTACAGTAAAGTGTGTTTTGAGCA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020273168.1	4.3e-204	CBL-interacting protein kinase 32-like isoform X2
Swissprot	Q2QY53.2	2.1e-187	OsCIPK32
trEMBL	A0A834Z6G8	1.7e-194	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G26980.3	71.96	0.0	650	CIPK3;SnRK3.17	CBL-interacting protein kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC6G06429	AT2G26980.3	428	118	2	7	433	8	434	71.96	650
AfisC6G06429	AT2G26980.4	428	118	2	7	433	18	444	71.96	649
AfisC6G06429	AT5G21326.1	434	130	2	1	433	1	433	69.59	633

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	13	268	243.2	2.6e-72
PF03822.11	NAF	Domain	307	367	72.7	1.8e-20

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005267	F	potassium channel activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0007584	P	response to nutrient
GO:0009414	P	response to water deprivation
GO:0009536	C	plastid
GO:0009705	C	plant-type vacuole membrane
GO:0009737	P	response to abscisic acid
GO:0009749	P	response to glucose
GO:0010107	P	potassium ion import
GO:0010118	P	stomatal movement
GO:0010167	P	response to nitrate
GO:0010540	P	basipetal auxin transport
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0042538	P	hyperosmotic salinity response
GO:0046777	P	protein autophosphorylation
GO:0048364	P	root development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K07198	PRKAA, AMPK; 5'-AMP-activated protein kinase, catalytic alpha subunit	EC:2.7.11.11	Apelin signaling pathway	ko04371
			FoxO signaling pathway	ko04068
			PI3K-Akt signaling pathway	ko04151
			AMPK signaling pathway	ko04152
			mTOR signaling pathway	ko04150
			Autophagy - animal	ko04140
			Tight junction	ko04530
			Insulin signaling pathway	ko04910
			Glucagon signaling pathway	ko04922
			Adipocytokine signaling pathway	ko04920
			Oxytocin signaling pathway	ko04921
			Axon regeneration	ko04361
			Longevity regulating pathway	ko04211
			Longevity regulating pathway - multiple species	ko04213
			Circadian rhythm	ko04710
			Thermogenesis	ko04714
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Bacterial secretion system	ko03070
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Biofilm formation - Pseudomonas aeruginosa	ko02025

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network