result

Gene information

Detail information of AfisC7G00303

Location

Gene	Chr	Start	End	Strand
AfisC7G00303	chr7	55105317	55108015	-

Sequences

CDS

>AfisC7G00303
ATGGCCACAATGGTTCTAATAAATTTGCTCCTGTTGTCAGTAACAATCACTGCAGCTGGTCAGCCCAACACTCTTCATCCCCACTGTCAAGAAAAATGTGGGAATCACAACATCCCGTACCCTTTTGGCATCGGGCTTGACTGCTCCAGGAACTCAGATTTTCACATAGTATGCAAAAAAAATGAAGATGGTGATTACTACCCGTATTCAGGCTTGAATGATAAAAGTACGCTAGCACTGTTCAATTTCTCCTTGCAGCAACATCAAGTCAATATGTTCAAACATATATCTTATGAGTGTTACAACAGTTCTGGACTTACAGATGACTCGTTTATCTGGGCTATGGACCTAAGTGATACACCGTTTGTGATTTCAGCAACCCGTAACAAGTTCACATCAATCGGTTGCAACACGATTGCATTTATAAATTCAAGTGCTAGCTCGTACGCTGCAGGTTGCATGGCATTTTGCAGGAATATTACTAACAAGAAGATGAGCGGGTCTTGCATGGGCACTGGTTGTTGCCAAACTTCTCTACCCGAAGACCTCCGTGATTATGATCCAAATTTTCAGGTAAGGAAGGTTACAGATGATACTTGGACGTACAATCCTTGTAGTTATTCTTTTGTTGTGGATCAAGATTGGTTCGTATTTAACGAATCATACCTCAGTGAATATCTGTTAATTGAAAAATACAAAGCGGGTGTGCCAATGGTTCTTGAGTGGGCAGCAGGGATGGAAAGTTGTTCGGTGGCACAGAAAAACCAAACCTCATTTGCATGCCAGGCTACTAACAGTCAGTGTATTGATTTGCCAAATGGCTATGTCTGCAATTGTACAGACGGGTATGAAGGTAATCCATATCTTAAAGATGGCTGTCATGATATTGATGAATGTAAAAGAAACTATACTTGTCATGGAAAATGTGAAAATATTGACGGCAATTACAAGTGTACATGCAAGGACGGATATTCTAGCAAAGATCCCAAAACTGCTGAATGCACCAAAATACCGATGCCACACTACGTCAACTGTATTGCAGGAATTGGTACGGGTATCATTTCATTACTTACATCAAGCTTCTGGATATACATGATTCGAGAAAGAAGAAAGCTTTCCCAAGAAAAAGATAAATTTTTCAAACAAAATGGAGGTTTGTTGCTGCATGAGGAACTCAGAAATAGACGAGAATCATCTTTCAGAATGTTCAAAAAAGAAGAGCTAGAGAAAGCAACAAACAATTTTGACAAAAACTTAATACTCGGTCGTGGAGGCCAAGGAACTGTTTACAAGGCAACTTTGGACAATGATATGGTAGTTGCAATAAAGAGGGCAAGGACAATTGATGAAAGCCAAAAGGAAGGATTTATAAAAGAAATCTTAATTGTTTCTCAAATCAACCATAACAATGTAGTTAAGCTATTGGGTTGTTGCTTAGAAGTAGAAGTGCCAATGCTGGTCTACGAATACATCTTTAATGGAACTCTCCATGATTATATTCATAATACTGAGACAAGACAATCAATTACATTGGAAACACGTATAAGAATTGCAGCAGAATCGGCAGAAGCGCTTTCTTACTTGCATTCGTCAGCTTCACCTCCTATTCTTCACAGGGATGTAAAATCATCTAATATATTGTTAAATGAGAAATACATAGCAAAAGTATCCGACTTTGGAGCATCTATTCTTGTGGCGAATGATGAAGTCCAACTGGCCACAGTTTTGCAAGGGACATTTGGTTATTTGGATCCTGAATATGTCCAAACATTCGTGTTTACTGAAAAAAGTGATGTGTACAGTTTCGGGGTAGTGCTTCTAGAGTTGCTAACAAGGAAGCGAGCTCTTCTTTTTGAAGGATCGGAAAATGAAAAGAATCTTGCATCAAGATTTCTTGCATTGATGAAAGAAAGACAGATTATCCAATGTCTGGATAACGAATTGGTCAATGAAGGACAAATGGAGACAGTTCATGAAATTTCGGAGCTTGCAAGGCAATGTTTGAGCATGAAGGCGGAAGACCGACCCACTATGAAAGAGGTAGCAGAAGAACTTCAAAGAATAAGAAGATACTCACAGCATGCATGTGCCCAGCATCATCAAATAGAGCCCG

Protein

Gene

>AfisC7G00303
ATGGCCACAATGGTTCTAATAAATTTGCTCCTGTTGTCAGTAACAATCACTGCAGCTGGTCAGCCCAACACTCTTCATCCCCACTGTCAAGAAAAATGTGGGAATCACAACATCCCGTACCCTTTTGGCATCGGGCTTGACTGCTCCAGGAACTCAGATTTTCACATAGTATGCAAAAAAAATGAAGATGGTGATTACTACCCGTATTCAGGCTTGAATGATAAAAGTACGCTAGCACTGTTCAATTTCTCCTTGCAGCAACATCAAGTCAATATGTTCAAACATATATCTTATGAGTGTTACAACAGTTCTGGACTTACAGATGACTCGTTTATCTGGGCTATGGACCTAAGTGATACACCGTTTGTGATTTCAGCAACCCGTAACAAGTTCACATCAATCGGTTGCAACACGATTGCATTTATAAATTCAAGTGCTAGCTCGTACGCTGCAGGTTGCATGGCATTTTGCAGGAATATTACTAACAAGAAGATGAGCGGGTCTTGCATGGGCACTGGTTGTTGCCAAACTTCTCTACCCGAAGACCTCCGTGATTATGATCCAAATTTTCAGGTAAGGAAGGTTACAGATGATACTTGGACGTACAATCCTTGTAGTTATTCTTTTGTTGTGGATCAAGATTGGTTCGTATTTAACGAATCATACCTCAGTGAATATCTGTTAATTGAAAAATACAAAGCGGGTGTGCCAATGGTTCTTGAGTGGGCAGCAGGGATGGAAAGTTGTTCGGTGGCACAGAAAAACCAAACCTCATTTGCATGCCAGGCTACTAACAGTCAGTGTATTGATTTGCCAAATGGCTATGTCTGCAATTGTACAGACGGGTATGAAGGTAATCCATATCTTAAAGATGGCTGTCATGGTAAGTTAACTCATCATTTGTGTTTACACACACACACACACACAAATACATTATGTATTTGTAGTCTACAATGCATGACCTTCCCTATGAATATATTCCCAGATATTGATGAATGTAAAAGAAACTATACTTGTCATGGAAAATGTGAAAATATTGACGGCAATTACAAGTGTACATGCAAGGACGGATATTCTAGCAAAGATCCCAAAACTGCTGAATGCACCAAAATACCGATGCCAGTAATAATTTCATCAGCGATTGTAGCAGAGAATAATGGACTTAGTTGGACAGTCAAGTTGATCATTGGTAAGTGCTGTATTTTTTTCTCCTGTTGTACAGAAAGATTCGGGAATTTATAAAGATCTAAACGGTGTACTGGACGCTATTGGCACATTGTCTAAATTTTTAAGCGTTAAGCAATGAATTCTAAAGTTTATGCTAGTTTGCAATTAAGCACTGCGACTCCCATGCATAAGTATATGCACAACTATTGTGATACATAAGGTCAGCAGTCAGCTAATTGTTTCACAACTCGAAATTTTATGCTTAATCCAATTGGCTGTACTCTTGCTGCCAAACAATATGAATATCCCGCGAGAAACTAATTTTTCACCTTGTTTGGACTCTGCATTAGATTTTTAGGTAATCATAAAACATATGACCCTAAGAACCTGTATTTACTAATGATATTTTAAGACATGCGGATTTATTTCATCTCTTCAGCACTACGTCAACTGTATTGCAGGAATTGGTACGGGTATCATTTCATTACTTACATCAAGCTTCTGGATATACATGATTCGAGAAAGAAGAAAGCTTTCCCAAGAAAAAGATAAATTTTTCAAACAAAATGGAGGTTTGTTGCTGCATGAGGAACTCAGAAATAGACGAGAATCATCTTTCAGAATGTTCAAAAAAGAAGAGCTAGAGAAAGCAACAAACAATTTTGACAAAAACTTAATACTCGGTCGTGGAGGCCAAGGAACTGTTTACAAGGCAACTTTGGACAATGATATGGTAGTTGCAATAAAGAGGGCAAGGACAATTGATGAAAGCCAAAAGGAAGGATTTATAAAAGAAATCTTAATTGTTTCTCAAATCAACCATAACAATGTAGTTAAGCTATTGGGTTGTTGCTTAGAAGTAGAAGTGCCAATGCTGGTCTACGAATACATCTTTAATGGAACTCTCCATGATTATATTCATAATACTGAGACAAGACAATCAATTACATTGGAAACACGTATAAGAATTGCAGCAGAATCGGCAGAAGCGCTTTCTTACTTGCATTCGTCAGCTTCACCTCCTATTCTTCACAGGGATGTAAAATCATCTAATATATTGTTAAATGAGAAATACATAGCAAAAGTATCCGACTTTGGAGCATCTATTCTTGTGGCGAATGATGAAGTCCAACTGGCCACAGTTTTGCAAGGGACATTTGGTTATTTGGATCCTGAATATGTCCAAACATTCGTGTTTACTGAAAAAAGTGATGTGTACAGTTTCGGGGTAGTGCTTCTAGAGTTGCTAACAAGGAAGCGAGCTCTTCTTTTTGAAGGATCGGAAAATGAAAAGAATCTTGCATCAAGATTTCTTGCATTGATGAAAGAAAGACAGATTATCCAATGTCTGGATAACGAATTGGTCAATGAAGGACAAATGGAGACAGTTCATGAAATTTCGGAGCTTGCAAGGCAATGTTTGAGCATGAAGGCGGAAGACCGACCCACTATGAAAGAGGTAGCAGAAGAACTTCAAAGAATAAGAAGATACTCACAGCATGCATGTGCCCAGCATCATCAAATAGAGCCCG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020277165.1	5.0e-191	putative wall-associated receptor kinase-like 16
Swissprot	Q9LMN8.2	9.1e-121	Wall-associated receptor kinase 3
trEMBL	A0A4S8JA27	4.9e-180	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21240.1	38.22	3e-133	472	WAK3	wall associated kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G00303	AT1G21240.1	709	387	19	4	689	9	689	38.22	3e-133	472
AfisC7G00303	AT1G21270.1	703	382	18	4	689	7	678	38.83	8e-133	471
AfisC7G00303	AT1G21210.1	709	382	19	4	689	6	684	38.65	7e-132	468

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	27	138	90.3	1.2e-25
PF07645.12	EGF_CA	Domain	295	331	26.2	6e-06
PF07714.14	Pkinase_Tyr	Domain	420	685	175.4	1.1e-51

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005576	C	extracellular region
GO:0005488	F	binding
GO:0006468	P	protein phosphorylation
GO:0009311	P	oligosaccharide metabolic process
GO:0051707	P	response to other organism
GO:0009751	P	response to salicylic acid
GO:0009826	P	unidimensional cell growth
GO:0009992	P	cellular water homeostasis
GO:0016301	F	kinase activity
GO:0048527	P	lateral root development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network