Detail information of AfisC7G00933


Location
GeneChrStartEndStrand
AfisC7G00933chr7188506359188509731+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008790766.11.4e-39squamosa promoter-binding-like protein 16
SwissprotB9DI20.15.4e-25Squamosa promoter-binding-like protein 13A
trEMBLA0A8B7C3839.9e-40squamosa promoter-binding-like protein 16

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G50570.146.987e-24 106SPL13;SPL13ASquamosa promoter-binding protein-like (SBP domain) transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03110.11SBPDomain11816563.71.3e-17

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0046872Fmetal ion binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009941Cchloroplast envelope
GO:0048653Panther development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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