result

Gene information

Detail information of AfisC7G02540

Location

Gene	Chr	Start	End	Strand
AfisC7G02540	chr7	507928310	507931401	-

Sequences

CDS

>AfisC7G02540
ATGACACTGCTCTCAACTCCATTCTCCAACCAAATGCACCTTCTCTTCTTCCTTCTCTTTCTCCTTACCCTTTCCCCCTCCTCCAGCACCCCAGAAACCCATTCTCTCCTCCTCTTCAAATCTCAATCCGACCCATTCAACAACCTCCACTCTTGGCTTCCATTTTCTGACCCCTGCTCTTCCTCCTCCTCGCCTTGGCTCGGCATCTCCTGCCTCCCCAACTCTTCCTACATCTCCCGCATTGTTCTCGAGAACCTCAACCTCCATGGCCTCATCCAAATCCTAACCTCCTCGTTCCCTCACCTCCGCGTCCTCAGCCTCAAACGCAACCGCCTCTCCGGCCCCATCCCCGACCTCTCCTCCCTCCCTTCCCTCCGCCTACTCTTCCTCTCCCACAACCTCTTCTCCTCCTCCCTTCCCCCTTCCCTCTCCTCCCTTCCCCGCCTCTCTCGCCTCGATCTATCCTTCAATCGCCTCTCCGGCCCTCTTTTCTCCGCCTTCTCCCACAACACCTCCCGCCTCCTCACTCTCCGCCTCAACTCCAACATTTTTTCCGGCTCCATTTCTCACCTCTCCTTCCCCTCTCTCCAGGAACTCGACCTTTCCCACAACTCCCTCTCCGGACCAATCCCGTTCCAACTTTCAAAATTTCCCGGTTCCGCTTTTGCCGATAACGCTGATCTGTGTGGGCCTCCGCTCCCTAGCTGTAAAATTAGGGTCCCGCCTGCGTCGGCTTTGATTGCGTCATCTCCAGTGGCGAAACCGGACTCAGGAGGTGGGAAGCTGAGCAGATTGGCTATAGTGGTAATTGTGGTTGGTGACTTTCTGATTTTGGTAGTGGTTGCTCTAATGCTGTTTTGGTATTTTTGGAGGAAATTCGTGAAAAGAGGGAGCTCCATTAACGAGAGTTCGAAAATCGTGTATTCTACTTCAATGATGTATGGAGGAGGAGGAGGTGGTGGCAGTGGTAGTAATGAAGGTGGATTTGAGAGAGGGAAGATGGTGGTGTTTGATGGGAAGAAGAGGTTTGAGCTAGAGGATTTGTTGAAGGCGAGTGCAGAGATGTTAGGAAGAGGGGTGTATGGGACCAGTTATAAGGCAGTGCTTGGTGATGGGAATGTGGTCGCTGTGAAGAGATTGCGGGAGGTTAATGGTGGTGGTGGAGTTGGGAAGAGGGAGTTCGAGAGTCAGATGGAGGTGATAGCGAGGTTGAAGCATGACAATTTGGTTGAGGTGAAAGCTTATTACTATGCTAGGGATGAGAAGTTGTTGGTTTATGAGTTTATGCCTGGTGGTAGCTTGTTTTCTCTTCTTCACGGTAATCGAGGTCCAGGGCGCACACCTCTAGACTGGACAACCCGAATGCGGATCGCAGCAAGCACAGCCCGTGGGCTTGCAGCCATTCACCACCACCACAACCCATCCACCTCAAAACCCGCTAAACTGTACCATGGCAACATCAAATCCACAAACATACTCATGGACAAATCATTCACTCCCAAACTCTCCGATTTTGCCCTAGCCCCTCTTTTCACTTCACAACCACCACGAACTGCTAACGCTTACACCCCTCCTGAATCCATTCTTTCTCAGAAAGCCGATATATACTCGTTTGGTGTGGTTTTGCTGGAGATTTTGACTGGGAAGGTTGTGTCCGAGGACGTAAATTTGCCTCAGTGGGTTCAGTCTGTGGTAAGAGAGGAGTGGACAAGCGAAGTGTTCGATCTTGAACTTATGAGGTACAAAGGAGTGGAGGAAGAGATGGTAGGAATGTTACAGATAGCTATGGCATGTGCTGCAATTGCCCCACAACAGAGGCCGAAGATAGGTCAGGTGCTGGAGATGATAGAGGAAATCCGAGGCAATGGGTCGCCTGCTTATGAATCTTATGGAGAAATCGACTCTTCCCCTTGTGTTTCTGATGACACTACAACTATGGCAAGTACCTGA

Protein

Gene

>AfisC7G02540
GGCAACTCTAAAAATGAAAAAATATGATCTTTTTGAATACTATGCTCTATATTCTTTATACAAGGGCTAAGGGGCAGCAAATATGATGACACCACATACAGTATCCTCTACTGCAACACTGACACCATGACACTGCTCTCAACTCCATTCTCCAACCAAATGCACCTTCTCTTCTTCCTTCTCTTTCTCCTTACCCTTTCCCCCTCCTCCAGCACCCCAGAAACCCATTCTCTCCTCCTCTTCAAATCTCAATCCGACCCATTCAACAACCTCCACTCTTGGCTTCCATTTTCTGACCCCTGCTCTTCCTCCTCCTCGCCTTGGCTCGGCATCTCCTGCCTCCCCAACTCTTCCTACATCTCCCGCATTGTTCTCGAGAACCTCAACCTCCATGGCCTCATCCAAATCCTAACCTCCTCGTTCCCTCACCTCCGCGTCCTCAGCCTCAAACGCAACCGCCTCTCCGGCCCCATCCCCGACCTCTCCTCCCTCCCTTCCCTCCGCCTACTCTTCCTCTCCCACAACCTCTTCTCCTCCTCCCTTCCCCCTTCCCTCTCCTCCCTTCCCCGCCTCTCTCGCCTCGATCTATCCTTCAATCGCCTCTCCGGCCCTCTTTTCTCCGCCTTCTCCCACAACACCTCCCGCCTCCTCACTCTCCGCCTCAACTCCAACATTTTTTCCGGCTCCATTTCTCACCTCTCCTTCCCCTCTCTCCAGGAACTCGACCTTTCCCACAACTCCCTCTCCGGACCAATCCCGTTCCAACTTTCAAAATTTCCCGGTTCCGCTTTTGCCGATAACGCTGATCTGTGTGGGCCTCCGCTCCCTAGCTGTAAAATTAGGGTCCCGCCTGCGTCGGCTTTGATTGCGTCATCTCCAGTGGCGAAACCGGACTCAGGAGGTGGGAAGCTGAGCAGATTGGCTATAGTGGTAATTGTGGTTGGTGACTTTCTGATTTTGGTAGTGGTTGCTCTAATGCTGTTTTGGTATTTTTGGAGGAAATTCGTGAAAAGAGGGAGCTCCATTAACGAGAGTTCGAAAATCGTGTATTCTACTTCAATGATGTATGGAGGAGGAGGAGGTGGTGGCAGTGGTAGTAATGAAGGTGGATTTGAGAGAGGGAAGATGGTGGTGTTTGATGGGAAGAAGAGGTTTGAGCTAGAGGATTTGTTGAAGGCGAGTGCAGAGATGTTAGGAAGAGGGGTGTATGGGACCAGTTATAAGGCAGTGCTTGGTGATGGGAATGTGGTCGCTGTGAAGAGATTGCGGGAGGTTAATGGTGGTGGTGGAGTTGGGAAGAGGGAGTTCGAGAGTCAGATGGAGGTGATAGCGAGGTTGAAGCATGACAATTTGGTTGAGGTGAAAGCTTATTACTATGCTAGGGATGAGAAGTTGTTGGTTTATGAGTTTATGCCTGGTGGTAGCTTGTTTTCTCTTCTTCACGGTGAGCTTTTTTTTATAGCTCTTTTTGTTCTATCTGTGCATCTTAATCGTTTGAGTTCATGGTAAGTTGAAGGTTTCGTTATTGCTGATTCTTGGTTAGTAATATACTAAGGATAAAGAACTTCTACGAACATATAAAGAAAATGTATGCTTAATAGGTATAAATTGTTTACCGAATACTTTGCATAAATTTTTTAGCAGTTTGTAACACAAATGTACCCTTATATTCGTGCATTTGGCGACGAAGAATTTGTTGCAGTAAATGCTACTGTTGTGATACTGTTCATATTATTACAGAATCCTTCATCACGTGGAATGTTTACAATCAACCTTTGTATAAATAATACAGTGTTCTGTGCGTTATTCATATACATACTCAACACCCTAGGTATTATTTGAGGGTTAAGATATAATTGATAATCTTGGTATATACTACAGATTCATCTTACACAAAACGAAGTTTATGCTGGCTACTTGAAACTCCATAAAGTTTAAAATAATCTTTAGCTCACTTTGTACAAGTTCATATTATAATTTCTCTTTGTATTACCAGATGATCTGTTTCAGTATAGGATGATGCACTTTCTCCTTGTTAATCCATAAATACCTGCATCTTCTTTTAGTAGTGTACATGTTGAAGGTCACTTGTGAAAAACTAATGATACTTTACAGGTAATCGAGGTCCAGGGCGCACACCTCTAGACTGGACAACCCGAATGCGGATCGCAGCAAGCACAGCCCGTGGGCTTGCAGCCATTCACCACCACCACAACCCATCCACCTCAAAACCCGCTAAACTGTACCATGGCAACATCAAATCCACAAACATACTCATGGACAAATCATTCACTCCCAAACTCTCCGATTTTGCCCTAGCCCCTCTTTTCACTTCACAACCACCACGAACTGCTAACGCTTACACCCCTCCTGAATCCATTCTTTCTCAGAAAGCCGATATATACTCGTTTGGTGTGGTTTTGCTGGAGATTTTGACTGGGAAGGTTGTGTCCGAGGACGTAAATTTGCCTCAGTGGGTTCAGTCTGTGGTAAGAGAGGAGTGGACAAGCGAAGTGTTCGATCTTGAACTTATGAGGTACATAACTTTTTGATACTTTGTGACTGAATTTATTCAGACACCGAAATTATAGGTAACGCTTAAGTTAGAAACAACTGAACCGAGTGTGTATGAATTGTGGGATTATAGGTACAAAGGAGTGGAGGAAGAGATGGTAGGAATGTTACAGATAGCTATGGCATGTGCTGCAATTGCCCCACAACAGAGGCCGAAGATAGGTCAGGTGCTGGAGATGATAGAGGAAATCCGAGGCAATGGGTCGCCTGCTTATGAATCTTATGGAGAAATCGACTCTTCCCCTTGTGTTTCTGATGACACTACAACTATGGCAAGTACCTGAGGCCTTTTCTTTTGGTGAGTTAATTTTTCAAGATTGTTATTGGTAAGTGGTAATAGTGAAGAGGTTGTAAATTGTGTTTATGGAATTTTTGGTAGGGTGGTAGTATAATTTTGATTATTGTCTGATTCATAATGTTATGAAGTAGGTAATTCTAGTTCAACTCGTGGTTTTGTTGCTTATACCCAAGTTAATTTTGCGTAACCTTTAATGATAAAAAATAACATATTCATCCTC

Functional annotation

Database	accession number	e-value	annotation
nr	RWR93851.1	7.8e-114	putative leucine-rich repeat receptor-like protein kinase
Swissprot	Q9M9C5.1	6.7e-102	Probable leucine-rich repeat receptor-like protein kinase At1g68400
trEMBL	A0A443PSU5	5.6e-114	Putative leucine-rich repeat receptor-like protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G68400.1	50.92	9e-163	570		leucine-rich repeat transmembrane protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G02540	AT1G68400.1	650	264	15	32	643	31	663	50.92	9e-163	570
AfisC7G02540	AT2G36570.1	655	307	17	32	632	24	658	41.83	1e-123	440
AfisC7G02540	AT2G26730.1	639	300	20	12	619	8	619	43.97	2e-120	430

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13855.3	LRR_8	Repeat	100	159	31.1	1.3e-07
PF00069.22	Pkinase	Domain	354	614	106.9	9.9e-31

Gene Ontology

Accession	Ontology	Name
GO:0022625	C	cytosolic large ribosomal subunit
GO:0003729	F	mRNA binding
GO:0005739	C	mitochondrion
GO:0004672	F	protein kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0005774	C	vacuolar membrane
GO:0009505	C	plant-type cell wall
GO:0009506	C	plasmodesma
GO:0009610	P	response to symbiotic fungus
GO:0009737	P	response to abscisic acid
GO:0016310	P	phosphorylation
GO:0044267	P	cellular protein metabolic process
GO:0080092	P	regulation of pollen tube growth
GO:2000605	P	positive regulation of secondary growth

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20359	RABAC1, PRAF1; PRA1 family protein 1	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network