result

Gene information

Detail information of AfisC7G02642

Location

Gene	Chr	Start	End	Strand
AfisC7G02642	chr7	525556120	525559251	+

Sequences

CDS

>AfisC7G02642
ATGGAAAAAGCTAGCGGTGGTGGTATGAGTTTGAACACAATGTCATCAAGTCCGATACCGTTCCTTGACCACGAAAGTTCGCCGATGAAGAGGAAGCAATCATCAACGGCGCCATTATTTCAACAGCAATTTGAGCTCTTGATTCCTCAACATGATCGCGCAAAGTCTAAACATGTCTATGAAATGGATTTCTTCTCAAACGAGAAAAAGAAAGCACTTTGTGATACAAACGTCGATCTTAAAGCTTCGGAGAGTATTATCAAGAAGGAAGATTTGACTATAAATACCGGATTGCACCTTGTAAGTTCAAACATTGGAAGCGATCGATCAACAGTTGATGATGGACCTTCGCCTACAAATGATGAAGATAAAGAAGCAAAAAATGAGTTAGAGAGGATACAAACTCAAATGGCACGTATGATAGAAGAGAATCAAAAACTGAGAGGAGCATTAAGCCAAGTGACCCACAGTTACAATGCTCTACAAATTCAGTTCATCGCCCTCATGCAGGGCCAACAAAACACAACAAATAATGTAGATGAAGTAAAAGCAGTAAGTGTAAAGAATCAAGAAAATGCAAGCGCAATGATGCCAAGACAATTCATGGATTTAGGACCTGCATACGCTAATGATAACATAGGCAAGCAATCTCAATCTTTAACTGAATTTCATAGTCCTGAGAGTGCTTCATCTCCTACTATCAGCAAAGAAAATAGCCTGGATCAAGCACAAACATTGCCTTCTTCCAAAGGTTCACAAGAGCCACAAGAGGCCACCATGAGAAAAGCTCGTGTTTCGGTTCGTGCTCGATCAGAAGCTCCCATGATTACGGATGGATGCCAATGGAGGAAATACGGGCAAAAGATGGCGAAAGGAAACCCATGTCCACGAGCCTACTACCGGTGCACCATGGCGACCGGTTGCCCAGTTCGCAAACAAGTACAAAGATGCGCCGAGGACCGTACGATCCTAATAACGACCTACGAAGGCAATCACAACCATCCGTTGCCTCCAGCAGCCATGGCCATGGCATCCACCACCTCTGCCGCCGCATCCATGCTTCTATCCGGATCAATGTCCAGCACGGATGGACTCATCATGAACGGAGCAATGCTGCCGTGCTCGTCGAGCTTAGCCACCATTTCGGCTTCTGCTCCGTTCCCTACCGTTACTTTGGACCTGACCCAGAATCCAAACCCGTTACAGTTTCAGAGGACGCCTTTTCATATGAACTTTCCACAGCAGCCGCAGTCTTTGCCACAAGTGTTTGGGCAGAATATGTACGGCAGTAATCAGTCAAAGTTTTCCGGGGTTCAAATGTCGTCTGATGCAGTAAGCGCTGCTACTGCTGCAATCACCGCCGATCCTAATTTCACGGCTGCTTTAACGGCTGCGATTAAATTAATGATTGGAGGCGGTAATGGTGCCAACAACAATGATGGTTGTGGTGGCAATGGTATCAACCCTGATAATTCGTTTAGTTCTTAA

Protein

Gene

>AfisC7G02642
CTTTTTCCTTATTTCTTCTTCTTCCTCTTTACTCAAAACCATTAAAAAAAAATCAATGGAAAAAGCTAGCGGTGGTGGTATGAGTTTGAACACAATGTCATCAAGTCCGATACCGTTCCTTGACCACGAAAGTTCGCCGATGAAGAGGAAGCAATCATCAACGGCGCCATTATTTCAACAGCAATTTGAGCTCTTGATTCCTCAACATGATCGCGCAAAGTCTAAACATGTCTATGAAATGGATTTCTTCTCAAACGAGAAAAAGAAAGCACTTTGTGATACAAACGTCGATCTTAAAGCTTCGGAGAGTATTATCAAGAAGGAAGATTTGACTATAAATGTAAACTTCAATTTTTTTTTCCTAATTGAGTTGTTATTACATATTGTTTATTTTGTTCGATTCCATATTGTTTGCTGATATGGAACAATCTTAGTAAATATAGTATTTTCAAAGAGTCGTCGATTACCAGGATCATGTAAATATTTCCTTTTTTCCACCATTGCTATATTAATCAAGCGAAAACTTATAATTAAATTAGATTTTATTATTCGTATTTATTGATTTCTTGTATGGGTTTCATTAGACCGGATTGCACCTTGTAAGTTCAAACATTGGAAGCGATCGATCAACAGTTGATGATGGACCTTCGCCTACAAATGATGAAGATAAAGAAGCAAAAAATGAGGTAATTAAGCAATAAATATTTGATTAATTAATTATTTTGCTTCAATTGACAGCTAACTGATTTGAAAATAATCATATCTCAGTCAATCATTAATTTTAATTACAGTTAGAGAGGATACAAACTCAAATGGCACGTATGATAGAAGAGAATCAAAAACTGAGAGGAGCATTAAGCCAAGTGACCCACAGTTACAATGCTCTACAAATTCAGTTCATCGCCCTCATGCAGGGCCAACAAAACACAACAAATAATGTAAGAACATTTTCCACATATTTTATAAATTCCATGCTGTACTTTACTTATTTCTCTTTATTTGAATCATTATGTAGGTAGATGAAGTAAAAGCAGTAAGTGTAAAGAATCAAGAAAATGCAAGCGCAATGATGCCAAGACAATTCATGGATTTAGGACCTGCATACGCTAATGATAACATAGGCAAGCAATCTCAATCTTTAACTGAATTTCATAGTCCTGAGAGTGCTTCATCTCCTACTATCAGCAAAGAAAATAGCCTGGATCAAGCACAAACATTGCCTTCTTCCAAAGGTTCACAAGAGCCACAAGAGGCCACCATGAGAAAAGCTCGTGTTTCGGTTCGTGCTCGATCAGAAGCTCCCATGGTCAGTCCATTTTCCATATTAATTCTCTAAATTTTATATATAAGATGGTTACTATTAGACATTTGAGTTTGAAGCTTTGTCTCTTATGATAGACATTTGTCTAGAGGTTTCAAAATTTTAAATCATATGGTCACTAAATGAATCGTCTTAGCGATGATTGAACTTGTTTTCAAGCTAGAGAACCTCTTATTACTACAGAAATTATGGACTTCGAAGTTGCATTTGTTTTAAATTCTGAATACTTGATTTTTATATACTTAATGTGGATACAAATCATATGTTCCCAATCTACAGAATTTCGTAAAGTTCTTTTATCTTCATGTTTATGTTTTTTTACAAAATTTCCTAAATTTCAACTGATTGGAGTTGGACACATCAACACACTATAAACTAGGATTAGGTTAGATGATTTATATCCATTTAATATTCAATACTATGATTGGCCTTACAGTGATACGAGGTAGAGAGTCATTAATCTCTATCTCTATTATTAACAATGAAAGTTTAATCAATTGAACTTTAACCAAGCATTTTTGAAATTCCGAAAATGCTTTAGATGTCATCTCATTTTTGATCACTCGTTAACTGAATAACACTATCAATTTGTATCATGTACCACCATTCTCTTCGTAATCATCAATCTCAAAGAAATCTCATCATCGATTTGCAAAATACACCACCAATAGGACTACTTAAAATAAACGTCTCTGCGGCAGCTAAAGTTCACTTATAATGCACACATAATAAAAACAATATTATTATAATAATTTGTTTTTGCACACAATTTATGCTAGTTATTAGGAAATAAACTTACTCAACTTGGAATTATTACAAGTGTAGTACTAAAAGCAATAAAGTTCACACTTACTACTACCGTGTGATGTACTATCAGGAAGTGCAGACTCTGAATTTGTTTCTAAATAGTGAATCGCTAATACCGAATTTCTCTATTTATGATTCTACAGATTACGGATGGATGCCAATGGAGGAAATACGGGCAAAAGATGGCGAAAGGAAACCCATGTCCACGAGCCTACTACCGGTGCACCATGGCGACCGGTTGCCCAGTTCGCAAACAAGTACAAAGATGCGCCGAGGACCGTACGATCCTAATAACGACCTACGAAGGCAATCACAACCATCCGTTGCCTCCAGCAGCCATGGCCATGGCATCCACCACCTCTGCCGCCGCATCCATGCTTCTATCCGGATCAATGTCCAGCACGGATGGACTCATCATGAACGGAGCAATGCTGCCGTGCTCGTCGAGCTTAGCCACCATTTCGGCTTCTGCTCCGTTCCCTACCGTTACTTTGGACCTGACCCAGAATCCAAACCCGTTACAGTTTCAGAGGACGCCTTTTCATATGAACTTTCCACAGCAGCCGCAGTCTTTGCCACAAGTGTTTGGGCAGAATATGTACGGCAGTAATCAGTCAAAGTTTTCCGGGGTTCAAATGTCGTCTGATGCAGTAAGCGCTGCTACTGCTGCAATCACCGCCGATCCTAATTTCACGGCTGCTTTAACGGCTGCGATTAAATTAATGATTGGAGGCGGTAATGGTGCCAACAACAATGATGGTTGTGGTGGCAATGGTATCAACCCTGATAATTCGTTTAGTTCTTAAATATCTTTTCCATCTTTCTTTCCTTTTCTTCTTAGTTAATTGTCAATTATCATTATTATTATTTTCTTTTTTCTTTTATAAAGAATAAATTGGAGTTATGGAGTTTTAATTTATGATTTGATGGAGTTTTCAATGTGGGATTTGACAGTTGTATTTTGGTAAACACTTGTTTTCATACGCGGTTTTGTATTGTTGAAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010916103.2	4.1e-115	probable WRKY transcription factor 31
Swissprot	Q9C519.1	8.5e-81	WRKY DNA-binding protein 6
trEMBL	A0A6I9R0Q9	3.0e-115	probable WRKY transcription factor 31

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G62300.1	50.10	1e-104	377	ATWRKY6;WRKY6	WRKY family transcription factor

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G02642	AT1G62300.1	481	165	14	61	485	89	550	50.10	1e-104	377
AfisC7G02642	AT4G04450.1	494	171	16	50	470	22	503	48.18	3e-104	375
AfisC7G02642	AT4G22070.1	497	162	15	59	472	30	516	48.69	1e-90	330

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	278	335	92.8	1.1e-26

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006952	P	defense response
GO:0005634	C	nucleus
GO:0009685	P	gibberellin metabolic process
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0016036	P	cellular response to phosphate starvation
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding
GO:0080169	P	cellular response to boron-containing substance deprivation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network