result

Gene information

Detail information of AfisC7G02806

Location

Gene	Chr	Start	End	Strand
AfisC7G02806	chr7	557305256	557306893	+

Sequences

CDS

Protein

Gene

>AfisC7G02806
CTCCTCTCTAATTATCACTCGCTATCTTCAATTATCTCTCCCTGTCCCTCCTTTAATATCCCCTTCCCTTTCTTTTTCTTGCCTCTCTTCATTTCCTCCTCTCCTCAATGTCCAGCAAAAAAATGTGATGCTCATGGAACTTGCTTCTTTGAATGGATTACAGTAACAGCAGGTCCTTAAATTCTACACCAGGTGAAGTAAACCAGTTACAAGAATCAGAAGCTGGATCCGTACAATCAGCACCATCTCCAACGAAGAAGAAGAAGAGAAGAAGACGAAAGAGGAGGAGGAGGAGGAGGAAACCAAGTCCCATTCACTAATGCCATGTCCGACCCCTTCCAACCCGACCCGCTTCAAACCCATCCGCTTACAAACCCGAACCCGCAAAGACCCGTCCACCACGCCCGCGGCAAACGGACCAACCCGGGCGAGATCGTCGAAGTCCAGGGCGGCCACATAGTCCGGTCCACGGGCCTGAAAGACCGGCACAGCAAAGTCTGCACCGCTAAGGGCCCACGAGACCGTCGGGTACGTCTCTCGGCCCATACCGCTATCCAATTCTACGACGTCCAGGACCGCCTCGGCTACGACCGCCCCAGCAAAGCAGTCGATTGGCTCATGAAGAACGCTAAATCCGCCATTGACGAACTCGCCGAACTCCCTCCTTGGCAACCCACCGCCACCACCGCGCCTCTTCGAACTACTAACCCTAATCAGTTTGGGGCCGGCGCGAGTTCGAGTTATCTTCCCGACTCCCTCCATTCCGACTCCATCGCCGACACGATCAAGTCGtTTTTCCCGATCCCATCGTCCAATGCAGGTGCATCGGATCTCCGCCTTTCTCTGCAGTCTTTCCAGGATCCGATCTACAACAATCAAACAAACGTACCGCATGGAAATCCGAACCAGATTTACCCAGGGTTTGGTTCATGGAGCGAGTACAATGTGGGCGGGTATGGAAATGGTCAGTTTTACGATTCGCAGAGGGGACCCCTTCAGTCCAGTAGTACAAGTAGTCAGCCTTTTGTTCGAGCTTGGGTTGATAACCCGGTACCCGACAACCCGAGTTACACCATCATGCATCCAAGTCAGGTTCAGTCCATCGGGTTAGTACCCGGTAACAGATTTTCCGGGTTTCGGATCCCAGCTAGGATTCAAGGAGAAGAAGAACATGATCACGGTGTGTCTGATAAGCCATCTTCTGCTTCTTCTGATTAATACATGCCATGTTTTAGTTATGTAGGTTCTATAAGAGAACCATTTGAAGTTTGCATTTGCTTTTTGTACGAGTGACGAGTAGAAGAATAAAAAGATTTGTTTCATGTTTGTTGTTTCAGTGATGAAGGGAGAATGTAAGATTTGATGTTAAAGTGTAGTTTCTTGATTTGAAATGTGATGGTCCTTGAAGGAATTCAGTGCTGCTACTGTAGATGACATTGCTGCTTCCTCGAACATACTTTTATAAGGTTAGATTTTAATACTACTTTTGTTGATTATCCCATATGCAGTGTTTGAGGATATCTGGATATGTCTACTTCTTATCTGCAGTAGCTGTCTTTTTATATTTTCTTTGTGTTTCTTTATTCATTGTTGGAAAAAGAATGGCACTATTAAAATATAAAGAAGATTGTCATGATT

Functional annotation

Database	accession number	e-value	annotation
nr	THU54623.1	1.7e-63	hypothetical protein C4D60_Mb10t27080
Swissprot	Q8LPR5.1	2.4e-51	Protein MATERNAL EFFECT EMBRYO ARREST 35
trEMBL	A0A8J5G767	1.3e-65	TCP domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G53230.1	44.54	6e-55	211	TCP3	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G02806	AT1G53230.1	348	87	14	35	282	33	374	44.54	6e-55	211
AfisC7G02806	AT3G15030.3	207	30	4	35	179	29	235	55.56	2e-49	192
AfisC7G02806	AT3G15030.2	207	30	4	35	179	29	235	55.56	2e-49	192

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03634.10	TCP	Family	50	125	109.9	1.5e-31

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008285	P	negative regulation of cell proliferation
GO:0009507	C	chloroplast
GO:0009637	P	response to blue light
GO:0009733	P	response to auxin
GO:0009793	P	embryo development ending in seed dormancy
GO:0009908	P	flower development
GO:0009965	P	leaf morphogenesis
GO:0030154	P	cell differentiation
GO:0031347	P	regulation of defense response
GO:0045962	P	positive regulation of development, heterochronic
GO:0048262	P	determination of dorsal/ventral asymmetry
GO:1903508	P	positive regulation of nucleic acid-templated transcription
GO:2000032	P	regulation of secondary shoot formation
GO:2000306	P	positive regulation of photomorphogenesis

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network