result

Gene information

Detail information of AfisC7G02969

Location

Gene	Chr	Start	End	Strand
AfisC7G02969	chr7	587584707	587587805	+

Sequences

CDS

Protein

Gene

>AfisC7G02969
CTTATTAGTTGTACAGACATAAGCGATTCATGGCTGGTAGAAGAGTTTTTAGAGGTTCAGAAACGAATGTTTTGCTGCGAAACGAGGATGATTCTGTTGGAAATTTTGAGGCTTTGCTCCCTTCAAGTTCTTCTCGAGCTGGATTTAGTGGTAATTTTCTTATTATTTTTGAATCTAAATACCTGATACAAAGTTCAAAACACACGTATATATTCATCTTTTTCAAGTAAAGATCTGATTATCATTAGTGGTATTTATGTAAGTAATTCTTTCTAATCTGGGTACCAGTTGTTCTATAGTTGTCACATAATTGGTGGTCATTGGATTATTATTTGCATATAAAAAATAAGGTATTTCTTGTTTAATTTTGGCAAGCATGTGTAAATAATCTAGACTCAATGAATTGGGAAATATTTGCTATATCTGGGATTCTGTTTAGCCTTATCTTTAATGGATGAATTGAAGTATACCTATGTCATACATGTGTAAATTTGTAATTACACTTATGGAACATGATGGCATGTCTATGATTATTAACTTTTTTTTTAATATAAGATTCGGTTATAATACAGAAATCAGAATTAATAGCCATCAAGCTTTAATTTTCTTCTTTCAATGCTATTACACGAACTATGCATATGTTTGTTTTGAAATTTGATATTGACTCCAAATACTTGATTCAGGGTCTAAATCGATGCTAAATTTTGAAGATGTATATGGTGGGAGTACAATCAATCAACAATTTTTCATACCAAGAGAAATCGAAGATGCAATTGATGATGATATAGATGACTGTCTTCACCAACCAGGGAAAAAAAGAAGACTATCAATCACTCAAGTTCAATTTCTTGAAAAAAGTTTCGACGTAGAAAACAAGCTTGAACCCGAGAGAAAAGTTCAACTGGCAAAGGAAATTGGGTTGCAACCAAGGCAAGTTGCTATATGGTTTCAAAATCGTAGGGCAAGATGGAAGACTAAGCAACTTGAGAAGGATTACAATGCATTAAAATCGAGTTATGACTCCTTGAAGGTTAGTTATGAGAACATGCTAAAGGAGAAGGAAGAGCTTAAAGAAGAGGTATACATACACTTGCCCTTTATAGTATTCTTTGAATATGCATCAATACTTATACAGTAATAATATATTGTTTGCATTTTGTTAAAAAAAATGTGTTGAATTGAAACCGACTTCTACTGCATGAAGTTATAGTGTTAATTTCATATTGGTGCACATTAATTAGTTTCATTTCATCATATCATTTCCATATTTCTTGTACAACCATCAATTTTTCTGGATACACACAAACACACACATATCAATGACATCTCAAATAGTGCAGCATCTCTGTAGCCTCCTGATTTCTACCCCCACAATCCGAATTAAATAACATGGCTTTCCCCCTAGCCATATTCTTGGTGGAAAACATGGGGCTACATGAGTGCTGCAAAAAAGGATGTCATTGGAGTAATAGTATGATGTGGAAGAGAGAGAAAATACTATTATTTAAATCAGATTGTGTGGTGGAAATCAGAGGGCTATGGAGATGCTGCAAAACAGGGGTACCATTGAACGCACGGGCGCGCATACACGTATATGTTGAAGTTGCCCCTCTCCATCTTACATGTCATCAAGACAAAAGTAAATTCACTAAGTAGTCATTAATTTAGACTAAAGTCCACATCAATCAATGCAACATTTAAGTTAACAGTACATCAAATATTTGATTTGATCAGTGGTTTTCGACAATGATTCGATTTCTTTATAAATTATATGTATTTTTTCCTAAAACATATAACAAATTTGGACCTATTTCAAAATATACTACAGATATAGATCTGTTTTTTTTTTCGATGTTGGCATTGTCTTAGCAATTTTATCTTGGCTTACTTTGAAATTGCACCAAACTAATTTTGTTCGGCTTTTTTCACTTGCACATTCTCCAAGTGCATCAAAAGAAATTCTTAAATAACAAAACTATACTTTGACACAATCTGAAAATTTCTTGGGAGAAATTACTAAATCTGTGCCAACCTGGTAAAAACTTACGAATATCCGCCATAAGTTTTGAAACAAGTTTAAATTTGTTATGAGTTTTGAAAAGTGAGTTAAATTGGTTAAAAAAAATCCAATATAACAAATCATACACACACACATATGAAAGCATCTCCAACAGCGTTGAAAGATAAAAAAAGTGGGGCAAACTCTCTTTTTTTGGTCTGTTATCACGTTTCAGCACTGTCGATTTGAGCGTGAGGATGGAGAAAAGTGGGATTTTCCTCCTCTTCTTTTTTTCCTTGAATCCTTAAAGATTTTTCTAAAAATCGTTTAGGATAGGTGGTTTTTCAAACCTCGTTTACCAACATAAACGGTATTGTTTTAATTTTATAAACAGCTTTGAGAAAACCGTTTATAGGCTAAACGTCTTTCAAAAACCAGTTTATAGTGTTTTTTTAAAAGGTCAATTCATTCCATTCCACTGCTCGAAGAGTGAGAGAAATTGACATTGTTATTTTATATTTTATATTTTATTTTAGGTTCTTTCCACCCAAAAAATGCTTGCAAATTGATCTTGTTACTTTGAAACCATGTCATATAACATCACAATAATATACAGGCGACTCATCTAACCGACAAGCTACTTCTACAAGAAACACACATTAACATGGCTGAAGAAAAATCACCTGACATAAAACCCATTGAAAGCGGTACAGTGAAACAAGAAGCTCAGAGCTCAACCATCAGTGCATTGTCCGAATCCGATAGCCCACATAGCACAGGCAGAGCACGCACCGATTCCTCCAATGCATTTGAGGCTGCCCATTCCGCTACATCATATATTGATCATAACGAAGATGTTAAAGAATATCATGAGTTTTGTAAACTTGAAGACCATTCGGGAAATTTCGATTTCCCTGTAGAAGATCACCCTTTTTGGCTATGGTCTTGATGTAGTTCATAGTATTTTGTATATGTGCAAGCAATGATGTTTGAATAGTTAGAAATGTTTAAGGTTGAATGTTTGTTTACAATGTTTCTATTTGCAAATGGTTAAGGATGATGTGTTATGAGTTACTGTAATTGGATAAGGAAATGAGAAC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020250149.1	2.0e-69	homeobox-leucine zipper protein HAT5-like
Swissprot	P46668.1	3.2e-24	Homeodomain transcription factor ATHB-6
trEMBL	A0A5P1FVN3	1.4e-69	Homeobox-leucine zipper protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G01470.1	41.44	1e-35	146	ATHB-1;ATHB1;HAT5;HB-1;HD-ZIP-1	homeobox 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G02969	AT3G01470.1	222	115	5	11	224	2	216	41.44	1e-35	146
AfisC7G02969	AT2G22430.1	97	33	0	84	180	62	158	65.98	9e-33	137
AfisC7G02969	AT1G69780.1	278	134	8	29	281	34	287	34.17	7e-31	131

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00046.26	Homeobox	Domain	84	137	57.7	6.8e-16
PF02183.15	HALZ	Family	139	180	49.5	3.3e-13

Gene Ontology

Accession	Ontology	Name
GO:0001558	P	regulation of cell growth
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0009414	P	response to water deprivation
GO:0009536	C	plastid
GO:0009637	P	response to blue light
GO:0009651	P	response to salt stress
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0009965	P	leaf morphogenesis
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0042803	F	protein homodimerization activity
GO:0043565	F	sequence-specific DNA binding
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09338	HD-ZIP; homeobox-leucine zipper protein	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network