result

Gene information

Detail information of AfisC7G03865

Location

Gene	Chr	Start	End	Strand
AfisC7G03865	chr7	746775548	746776619	+

Sequences

CDS

Protein

Gene

>AfisC7G03865
TAACAAGAGAGCCTTACAGTGTCAAATAATTAACTAAAAGAAAAGGAAGAATAAGAAGACATAATTAAAGAAGAAATTAGAGAAATGGTGAGAGCCCCCTGTTGCGAAAAGATGGGTCTGAAGAAGGGACCATGGACCAAAGAAGAAGACGAGATACTCATCTCTCATATTTCTAAGCACGGCCATGGCAACTGGAGAGCTCTTCCTAAACATGCTGGTGATTAAGTTTGCTTAGTTTTCACTAAATTCAAATATGTTTATACTAATCAGGAACCACTTCTTATCTTAATCTGATCTGACAATTTTGTTTTGTGTATGTAAAGGCCTAATGAGGTGTGGGAAGAGCTGCAGGCTGAGATGGATAAACTACTTGAGACCTGATATTAAAAGAGGAAACTTTAGCAGAGAAGAGGAAGACATGATCATAAGCTTACATGAACTTCTTGGTAACAGGTCATAATTTACCCTTCCTACATACATACATACATACATACATACAAAATGGATACAGATCACTGATCCTTCAGTAAAATAGCAGATGGTCAGCAATAGCAGCAAAATTGCCAGGAAGAACCGACAACGAGATCAAGAACGTGTGGCACACACACTTAAAAAAGAGAGCAAATCAGAATTTAACTCCTCCTGCTAAAAATATGAAGGAAAAGATAATGGTTAGTGATGATGATATGAGCTCACCAAATAGCACATGCAGTGAAGCATCTTCAGCTATCACAAGAGAAAGCAGTGATGGTGAATGCATTAAAGAGGAAAGCATGGAATCTTTTGCAGGGTTTCCAGAAGTGGAATTGGATGTGTTGTTGTCGATGGATACGAACTTGGACTTCGCCTCTGATGATATGAGTTACTGGTTAGATGTGTTCACGGAAAATGGAGGTGGTTTTGATTTGGAAATGCCTAGTTTATAGAACATTACATATATATGTGGAGGGAATAGTATATTACTGCTAACATTTTAAACTGTATGATGTTGTGTTTGTTCTCTGAAATGGATGATCAAAGTATGCATGATATTAATGTAAATTTCATTTCGATAGTTTTAGTTGTTTCAAAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020250172.1	2.3e-41	myb-related protein Myb4-like
Swissprot	Q7XBH4.2	1.7e-33	Transcription factor RLTR1
trEMBL	A0A1R3L6N8	1.7e-41	Myb-related protein Myb4-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G23250.1	67.59	4e-36	147	ATMYB15;ATY19;MYB15	myb domain protein 15

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G03865	AT3G23250.1	108	32	2	1	105	47	154	67.59	4e-36	147
AfisC7G03865	AT1G16490.1	151	65	3	1	143	49	199	51.66	4e-35	143
AfisC7G03865	AT2G31180.1	193	74	3	1	159	47	237	43.01	1e-34	142

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	21	66	54.1	1.2e-14

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000981	F	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001135	F	transcription factor activity, RNA polymerase II transcription factor recruiting
GO:0005634	C	nucleus
GO:0006357	P	regulation of transcription from RNA polymerase II promoter
GO:0009611	P	response to wounding
GO:0009651	P	response to salt stress
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009800	P	cinnamic acid biosynthetic process
GO:0009809	P	lignin biosynthetic process
GO:0009866	P	induced systemic resistance, ethylene mediated signaling pathway
GO:0009909	P	regulation of flower development
GO:0010200	P	response to chitin
GO:0010224	P	response to UV-B
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0046686	P	response to cadmium ion
GO:0030154	P	cell differentiation
GO:0043565	F	sequence-specific DNA binding
GO:0071281	P	cellular response to iron ion
GO:0071732	P	cellular response to nitric oxide
GO:1900384	P	regulation of flavonol biosynthetic process
GO:1903086	P	negative regulation of sinapate ester biosynthetic process
GO:2000652	P	regulation of secondary cell wall biogenesis

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09422	MYBP; transcription factor MYB, plant	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network