result

Gene information

Detail information of AfisC7G05709

Location

Gene	Chr	Start	End	Strand
AfisC7G05709	chr7	1030334247	1030336539	+

Sequences

CDS

>AfisC7G05709
ATGAAATGCGATAAGCTGAAATGTATAAAGAGTGCAGAGTCAAATATACCTACTATAATCATCAAACACAGTGTTTTGGAAGATGATGCAGTAGAAGAACCAAAGGAACAAGCCATTGGTATAACGAGAAGCAGCAGGATCAGACTACACCGTCCTTTTGAATTTCCAAAATTAGAGTGCCACATAACCAAAGTAACATCGTTTTCTGTTGCATTACTTCAGCAATATACACATGGTTTCAGAAAAGAAAATCTGATTTGGAAGAACAGTGTAAGCAAAACCTATCTAGGGGAGCTTCCTGATGGTAAACTGCTGACACTTGTGAATCTTGACAATGCAAACTTAAAAATAGATGCAGGCGATTTTCTTGATTTCATATCAGCCATCTCATACCTTCGTAACCCTTATATAATGGAACTTGTGGGTTACTACATGGAGTATGACCAAAGAGTACTTGTCTACAACTACTTTAGTGAAACAACTCTTCATGACATACTTCATAGTGAAGCTGAATTAAAAAAGAATCTTTCATGGAATGCTCGTGTTAAGATTGCACTTAGGGCCGCTAGAGCATTGGAGTATCTCCATGAACGTTGTCTTCCTCCTGTTACTTACAAAATATTCAACTCCTCAAAAATCTTTGTTGATGAATTTATGAATGTACGTGTTTCAGAATGTGGCCTTGCTTCACTAACAATGTCAATCTACAACAATCAGGTGCATGAACAAATTGGTAGTGAGGCTCCAAAAGTTAGCAATTGTGGGTCATGCACTGATAAAAGTGATGTGTATAGTTTTGGTGTGGTTATGTTAGAATTACTTACTAGGCGCAAGCCTTATGAGAGTTGGAGGCCTGGAGAAGAAGGATATTTAGTGAGGTGGGCAAGCTCTAAGCTAAAGCGTCTGTATGACATTGATGGTTTGTTCGGTATTGTAGATCCTTGTTTGAATGGAGAGGTTGCTATGGAATCACTTTCAAGTTTTTTTGATATTGCATGTCGTTGTATTCAGCAACAACCTAGGTTTAGAGATGCCATGTCTGATGTTGCACTGGATCTCATCAATTTGATGGACAGTATGAAGAAACAACTCTTGAAATATTGA

Protein

Gene

>AfisC7G05709
AGTTATTACAATCGCCTCATTTATTGTTGTAGTGCTTGCAATTACCATTTGTATTTCAAAGTTAAAGGAACAGGCTATAGAAGATCCTCCAATAATGAAATGCGATAAGCTGAAATGTATAAAGAGTGCAGAGTCAAATATACCTACTATAATCATCAAACACAGTGGTAAGGACTTAAGTTTGTTATTCTTCTTTTTATGTAGGTTCGTTATTATGAAGGAAAACTCATTTATCATACCTTAGTGGTTTTCTCCGACAAAGTTTTTCAGTCACATAGTTTCGATATTTATGATAATAATACTTAATACATCTGTGTTAACACATGGTTATCCTTATTTTATCACATTTTTTAACCATTATGCTCTTAGATTTTATATGCAATTGAAATGAACTTTAGTGTTTGTTAGTTATTTAACTGTGCAGTATATAACTTAGGGAATTCCCTGTTGTATAGATTTCAAGGAATTCTTTTTGCAATACAGATTTTGCTCTGTTTACAATTGATATTTTCAGTTTAAAAGTGCACTCAATATAATAGCAGCAAGGAGAGTAAAAAGGATATGGTTTTATCAGATTAGAGGTATACTTAAATATGTTCCAGTTTAGAAGTATTCTATATATTCAAGGAATACTAAATAAGTTTTTGTGTAACAACTGTCTCTATAGTTTTTCCATTAACTTTATCATACTTAACACATGTTAGTAGCAAGGAGATTAACAAGGATAGGGTTTATATCTCTGTTATTGGCTCTTGAAATGTTTATTTCAAAAAAAGGTTAGTTTCCCAAAAAGGCTTCTTTAAACAAATCATTAAACATATCATTAGTATGTTGAATAAGACTTCTTCAAACCTATCGCTGATATTCTACATTGCACATTTGCACCTTTTTGCATACTTTTTGTTGAACGTTTGTTCAATTTGAAAACAGTTTTGGAAGATGATGCAGTAGAAGAACCAAAGGAACAAGCCATTGGTATAACGAGAAGCAGCAGGATCAGACTACACCGTCCTTTTGAATTTCCAAAATTAGAGTGCCACATAACCAAAGTAACATCGTTTTCTGTTGCATTACTTCAGCAATATACACATGGTTTCAGAAAAGAAAATCTGATTTGGAAGAACAGTGTAAGCAAAACCTATCTAGGGGAGCTTCCTGATGGTAAACTGCTGACACTTGTGAATCTTGACAATGCAAACTTAAAAATAGATGCAGGCGATTTTCTTGATTTCATATCAGCCATCTCATACCTTCGTAACCCTTATATAATGGAACTTGTGGGTTACTACATGGAGTATGACCAAAGAGTACTTGTCTACAACTACTTTAGTGAAACAACTCTTCATGACATACTTCATAGTGAAGCTGAATTAAAAAAGAATCTTTCATGGAATGCTCGTGTTAAGATTGCACTTAGGGCCGCTAGAGCATTGGAGTATCTCCATGAACGTTGTCTTCCTCCTGTTACTTACAAAATATTCAACTCCTCAAAAATCTTTGTTGATGAATTTATGAATGTACGTGTTTCAGAATGTGGCCTTGCTTCACTAACAATGTCAATCTACAACAATCAGGTAAATTAATTGTTATGTTCACTTCTTGTCAATACTCTTTCTTCACATTTATCTTAACTTTCATCCAGTGCATTTGTAGGAAAATCTGAGTTTAAGAATTATTATACATAGATAAAACAAAATGCTTTGGTGTATGTTTTTGTTTTTCAGATTTTCAGTAAATAAATGATAACATAAATTATATACTGCAGGTGCATGAACAAATTGGTAGTGAGGCTCCAAAAGTTAGCAATTGTGGGTCATGCACTGATAAAAGTGATGTGTATAGTTTTGGTGTGGTTATGTTAGAATTACTTACTAGGCGCAAGCCTTATGAGAGTTGGAGGCCTGGAGAAGAAGGATATTTAGTGAGGTGGGCAAGCTCTAAGCTAAAGCGTCTGTATGACATTGATGGTTTGTTCGGTATTGTAGATCCTTGTTTGAATGGAGAGGTTGCTATGGAATCACTTTCAAGTTTTTTTGATATTGCATGTCGTTGTATTCAGCAACAACCTAGGTTTAGAGATGCCATGTCTGATGTTGCACTGGATCTCATCAATTTGATGGACAGTATGAAGAAACAACTCTTGAAATATTGATCCACTTGTTTGAAGATGTTCTATTGTTCTCCAGTTGCAATTATTTTTCATGTAAGCAAGTTAAGTAGTGTGTATTCAGCAGCAGCAGCAGCAGGAGTAGTAGTACTCTACTGTAGTATGATAATCTGTAAGTAACTCTTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020268790.1	1.1e-93	protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X2
Swissprot	Q6R2K3.1	3.9e-67	Leucine-rich repeat receptor kinase-like protein SRF3
trEMBL	A0A5P1EJ32	8.2e-94	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G03390.1	47.18	8e-70	261	SRF3	STRUBBELIG-receptor family 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G05709	AT4G03390.1	301	150	4	62	357	467	763	47.18	8e-70	261
AfisC7G05709	AT4G22130.2	314	168	4	48	357	223	532	43.95	2e-68	256
AfisC7G05709	AT4G22130.1	314	168	4	48	357	364	673	43.95	4e-68	254

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	119	284	70.3	1.4e-19

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000904	P	cell morphogenesis involved in differentiation
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0004871	F	signal transducer activity
GO:0005488	F	binding
GO:0005634	C	nucleus
GO:0007166	P	cell surface receptor signaling pathway
GO:0007623	P	circadian rhythm
GO:0009506	C	plasmodesma
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009932	P	cell tip growth
GO:0010059	P	positive regulation of atrichoblast fate specification
GO:0010063	P	positive regulation of trichoblast fate specification
GO:0010071	P	root meristem specification
GO:0010305	P	leaf vascular tissue pattern formation
GO:0016310	P	phosphorylation
GO:0042127	P	regulation of cell proliferation
GO:0048366	P	leaf development
GO:0048481	P	plant ovule development
GO:0048588	P	developmental cell growth

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network