result

Gene information

Detail information of AfisC8G00145

Location

Gene	Chr	Start	End	Strand
AfisC8G00145	chr8	32972319	32977563	+

Sequences

CDS

>AfisC8G00145
ATGGCCATGGTGGTGAGCAGGCAGGGGCAAAATGGGAACAATCAGCAGCAGATAGACGCAGGAAAGTACGTTAGGTACACACCTGAGCAAGTAGAAGCTCTCGAAAGGGTGTACAGTGAATGCCCAAAACCTAGCTCAATTCGAAGGCAACAACTCATTCGAGAGTGTCCTATTTTGTCTAATATTGAGCCAAAACAGATCAAAGTTTGGTTCCAGAATCGAAGATGTCGCGAGAAGCAAAGAAAGGAGGCGTCTCGTCTCCAGACTGTAAACAGAAAGTTAAATGCAATGAACAAGCTGTTGATGGAGGAAAATGATCGCCTGCAGAAGCAAGTGTCTCATCTTGTTTATGAAAATGGCTACATGCGCCAACGAGTGCATACTACTGCTGCTACTACAGATAATAGCTGTGATTCTGTGGTGTCAAGTGGTCTACACCATCAACAGCAAAATCTGACCTCTCAGCAACCCCAAAGGGATGCTAATAACCCAGCTGGTCTACTCGCAATAGCTGAGGAGACAATGGCTGAGTTCCTGTCCAAGGCGACTGGAACCGCCATTGATTGGGTGCAGATGGTTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCATTGCAATATCACACAACTGTTGTGGTGTTGCAGCAAGAGCATGTGGTCTTGTGAGTCTCGAACCCACAAAGGTTGCTGAAACTCTCAAAGATCGCTTATCATGGTATCGTGAGTGCCGTTCGGTTAATGTGGCTACTGTAATACCTACTGGAAATGGTGGTAACATTGAAATTCTTTACATGCAGACGTATGCGCCGACAACTTTGGCACCAGCGCGTGACTTTTGGACGCTTAGATACACAACTGGTCTTGATGATGGTAGTCTTGTGATATGTGAGAGATCATTGAATTCTTCAACTGGAGGCCCAGCAGGGCCCGTCGTACCAAACTTTGTAAGGGCTGAGATGTTGCCAAGTGGTTATTTAATCAGACCCTGCGATGGTGGTGGATCTATGATCCACATAGTTGATCATCTTGATTTTCACGCTGGCCGAGTGCCTGAAGTTCTTAGGCCTTTATATGAATCACCAAAGATATTAGCACAGAAAATGACTATTGCTGCATTACATCATATTAGGCAGATTTCTCAAGAAACCGGAGGGGATGTTGCATATGGACGCCAGCCTGCAGTTTCTAGAATGTTTTGCCAGCGTTTAAGCAAAGGTTTCAATGATGCTGTTAATGGATTCCAAGATGATGGTTGGACTTTGCAAAGGAGTGATGGAATAGATGACGTGACTATGATGATCAATTCATCACCAAATAAACTTCTAGAATCTCATGCTACCTCCGCATTGTATCCTTCTTCTGGGGGCATCTTATGTGCAAAGGCATCCATGCTTTTGCAGAATGTGCCACCTGGATTGCTTGTTCGGTTCATAAGGGAGCATAGGTCCGAGTGGGCTGATTATGGTGTAGATGCGTATTCAGCTGCCTCTGTAAGAGCTAGTCCTTACTCTGTTCCCAGAGTTGGAGCTTGTAATGGCTTATATGCTGGTCAAGTTATGTTGCCTCTTTGCCATACTATAGAAAATGAAGAGTTTCTGGAAGTTGCAAGGTTGGAAAGTCATGGATTTAACCAAGAAAGTGTTATTACAAGGGACATGTTTCTACTACAGCTATGTAGTGGAATGGATGAGAATTCAGTTAATTCATGCGCTCAACTTGTGTTTGCACCAATAGACGAAGCTTTTGCTGATGATGTGCATTTGCTTCCCTCGGGCTTCCGTGTTATTCCACTTGAGTCTAAAATGGATTTACCTACTGGGAATAGAACGCTTGACCTTGCTTCAGCACTGGAAGTAGGAACTGGCGCAATATCTACTGCTGCCAATAAAAACACTTCGCATACTTACAACTGTAGATCTGTACTTACAATTGCCTTCCAGTTCACTTACGAGGATCATCTGAGGGAAAACGTGGCAGCAATGGCTAGGGACTATGTTAGAAACATTATAATTTCTGTTCAGAAAGTTGCTTTAGCAATATCACCATCGCAAATATGCAACAGTCGCCTAGGAGAAAATCTCTTGCCTGCTTCTCCTGAAGCTCGTACTCTTGCTCGCTGGATTTCTAAAAGCTATAGGTTTCATACTGGAGCAAGTCTTCTACGGTCTGAGTCTTTAGATGATGATACTTTGTTGGAAAACCTGTGGCGACATTCTGATTCCATCATGTGTTGCTCTCTTAAGGCATCACCAGTGTTCACATTTGCGAATCAATCTGGACTAGACATGCTGGAAACGACACTAGTTGCTCTTCAAGACTTGACCCTAGACAAAATGCTCGATGACAATGGTCGCAAGGGGTTGTGTCAGGAGTTTCCTAAAATCATGCAGCAGGGATATGCGTATTTGCCAGGTGGGATATGCATGTCGAGCATGGGGAGGCCAGTGTCGTATGAACAAGCTGTAGCCTGGAAAGTTCTGAATGATGAGGAAGCGCATCATTGCTTAGCTTTTACTTTTGTGAACTGGTCTTTTGTTTGA

Protein

Gene

>AfisC8G00145
TTCTCAGTTCTCTCTCCTATCTCTCTTCAAAGTTCGTAGTAAAAGAAAAGGGTAAAAGTAATTCGAAATCATCCCAAATTCTCCAAAAAAAACCACAAGGATAAAAATGGAATCTGTTTTATCACTCATTTAATAGAACATCAAAAAAGTTTCAGTCTTTTCCAAGTTCTTTGAGAAATGGCCATGGTGGTGAGCAGGCAGGGGCAAAATGGGAACAATCAGCAGCAGATAGACGCAGGAAAGTACGTTAGGTACACACCTGAGCAAGTAGAAGCTCTCGAAAGGGTGTACAGTGAATGCCCAAAACCTAGCTCAATTCGAAGGCAACAACTCATTCGAGAGTGTCCTATTTTGTCTAATATTGAGCCAAAACAGATCAAAGTTTGGTTCCAGAATCGAAGGTATTATAAAGCTCAAACATTTGTCATTTTTAGAATTTGCTTTTGATTATAACTGTGCTTGCGTTCAAATTTTGTTTTCTGTGTTTGTTGGTTACTTGTAGTTTTGAAATTATTTTCCCAAGATCTCATAGTAGGTTTGTTTTAGGTACGACTGGTTTAATGTAATGTGTTTGGTAGTTTTCCAATTTTGTTTGAACTTTAACATATTTATAATAAAGTAATTATTTTTGTCTTAGGTTTGAAATGATCGTATATGAATTCTAGTTCGTCTCTAATTTTGTTATCGTTTTGGAAGTATTCTATCAAAGAAGTATATTTTAGCTCGTCATATAACTTATTCCAGTCAACTATTGTACAATAGCTACCTAAACTTGGAATGTACATAAATATAGAAAAACCAATTTTCCTTTATCTATTAGTTTGTGTGTTTTAAAATATTCATGTAAAAAGAAGAGTGAATTCCGGTTAATGAAGCAATATAATCATTCAAGCAAAAATAATTATTTTCATGCTATATAGTGGAACTTGAATCTTGAGTGAAATTATATGCAATGCTTTACAATTGACATATAGATGTCGCGAGAAGCAAAGAAAGGAGGCGTCTCGTCTCCAGACTGTAAACAGAAAGTTAAATGCAATGAACAAGCTGTTGATGGAGGAAAATGATCGCCTGCAGAAGCAAGTGTCTCATCTTGTTTATGAAAATGGCTACATGCGCCAACGAGTGCATACTGTAAGAATCATATATTCTTTACCATTTTCTTCAAAAATTGAAATCTTCGACCTGTTATATATATACATATACGCATAAACATATACATATATATAACATATATGTATATAGATATTGATATAGATATATGTTATATATACATATACATATATATAACATATATCTATATACATATATGTTATGTATACGTATATGTATATATATGTTATATGTTATGTATATATATGTTATATATATGTGTGTGTGTGTGTATATATATATATATTATTCAGTTACTTGGTCTATATATGCTAATAAGAACATTCAGTTGCCGTATCACATTAATTACAGCTGAACTAATCAAAGAGCAAGTAAATTTGTTATAGCTTTGTAACAGTACTGTTCTGTAATTTATTCCAAGTACATACAGGTTTATGTAGTCAGTTTCTAATGCCCTATCTTGAAAAACGCAGACTGCTGCTACTACAGATAATAGCTGTGATTCTGTGGTGTCAAGTGGTCTACACCATCAACAGCAAAATCTGACCTCTCAGCAACCCCAAAGGGATGCTAATAACCCAGCTGGGTAATTCTACAACCACCTGCACGCGTGCGCGTGCGCACGCACACACACATAATGCTGTTATTATTATTATTATTATGTGTGATTATGATTATAGCTGATATAATTTTATTTCAATACAGTCTACTCGCAATAGCTGAGGAGACAATGGCTGAGTTCCTGTCCAAGGCGACTGGAACCGCCATTGATTGGGTGCAGATGGTTGGAATGAAGGTTGATTTTTCTTTCAAATTTTCTTTTGTGCATCCTTTCATTTCGCAGTTCTAATTTCTTTATTTTTAATACATAGCCTGGTCCGGATTCCATTGGAATCATTGCAATATCACACAACTGTTGTGGTGTTGCAGCAAGAGCATGTGGTCTTGTGAGTCTCGAACCCACAAAGGTAATTAGTTTTCTTGAATATTTTGAATTATGGACTATTGTTATTTAGGAAGCTTTAATAGTAGTTCTTCAGGTTGCTGAAACTCTCAAAGATCGCTTATCATGGTATCGTGAGTGCCGTTCGGTTAATGTGGCTACTGTAATACCTACTGGAAATGGTGGTAACATTGAAATTCTTTACATGCAGGTAATCAATTATCGTCTAATAGTAGTATGTATGCATACACATGTGCACATTTTGTAACTGTTAGCTCTGATAATGCAAATAATATCCTTATTGTTTTTTTATAGACGTATGCGCCGACAACTTTGGCACCAGCGCGTGACTTTTGGACGCTTAGATACACAACTGGTCTTGATGATGGTAGTCTTGTGGTAAATTACATAACTGAATTCTTAATGCTATTGAAACAAAGTTTGCAGCATACAGAACTAATCGACTTTGTTATATGCAAATAGATATGTGAGAGATCATTGAATTCTTCAACTGGAGGCCCAGCAGGGCCCGTCGTACCAAACTTTGTAAGGGCTGAGATGTTGCCAAGTGGTTATTTAATCAGACCCTGCGATGGTGGTGGATCTATGATCCACATAGTTGATCATCTTGATTTTCACGTGAGTCTTGCATATTACATGTATAAATATATTATACTGATTGTTTTCCCTGCTTGGTTCGACTCATTGCTAATATGTATGTGCACTTTGGGTTTAGGCTGGCCGAGTGCCTGAAGTTCTTAGGCCTTTATATGAATCACCAAAGATATTAGCACAGAAAATGACTATTGCTGTAAGTCTTCAACATTATACATATAACGTGTAATTATATAACCGAAAACGCTGTAAACTAACTGTTGTGCTTTATGTTTGTAGGCATTACATCATATTAGGCAGATTTCTCAAGAAACCGGAGGGGATGTTGCATATGGACGCCAGCCTGCAGTTTCTAGAATGTTTTGCCAGCGTTTAAGCAAGTATGCTCTTGGAACTTTTTTTTCTTTTCAGATTTCTAATTAACACCAGACAGTTAATATATATCTTTCACTTTGAAATGATATATCTATAGAGGTTTCAATGATGCTGTTAATGGATTCCAAGATGATGGTTGGACTTTGCAAAGGAGTGATGGAATAGATGACGTGACTATGATGATCAATTCATCACCAAATAAACTTCTAGAATCTCATGCTACCTCCGCATTGTATCCTTCTTCTGGGGGCATCTTATGTGCAAAGGCATCCATGCTTTTGCAGGTTCTATTCTATACAATAACATTCTACAGTCTCAACTCACCTGTGCTTTTTCTTCTTCTTTTAATTTGAAATTTGAAACAACTTTTTTGGTGTAGAATGTGCCACCTGGATTGCTTGTTCGGTTCATAAGGGAGCATAGGTCCGAGTGGGCTGATTATGGTGTAGATGCGTATTCAGCTGCCTCTGTAAGAGCTAGTCCTTACTCTGTTCCCAGAGTTGGAGCTTGTAATGGCTTATATGCTGGTCAAGTTATGTTGCCTCTTTGCCATACTATAGAAAATGAAGAGGTATTGTGCTAGTTCTTCTGACTAGTTTATAAGATGAAAAAGTTCATATCAACTAATACATCTAGTCTGAAATTGTAGTTTCTGGAAGTTGCAAGGTTGGAAAGTCATGGATTTAACCAAGAAAGTGTTATTACAAGGGACATGTTTCTACTACAGGTTGGTTTGCATGTTTGAAAAACTAATGTTGCTTTGATAAAATTTACTAATGCAGTTTTTTTGCATGGCAGCTATGTAGTGGAATGGATGAGAATTCAGTTAATTCATGCGCTCAACTTGTGTTTGCACCAATAGACGAAGCTTTTGCTGATGATGTGCATTTGCTTCCCTCGGGCTTCCGTGTTATTCCACTTGAGTCTAAAATGGTAATTTGATTTTTGCATGCGACTAGTACCAAGTTTAAACGTTTTGCTGATAACGTCATAATTTATACAGGATTTACCTACTGGGAATAGAACGCTTGACCTTGCTTCAGCACTGGAAGTAGGAACTGGCGCAATATCTACTGCTGCCAATAAAAACACTTCGCATACTTACAACTGTAGATCTGTACTTACAATTGCCTTCCAGTTCACTTACGAGGATCATCTGAGGGAAAACGTGGCAGCAATGGCTAGGGACTATGTTAGAAACATTATAATTTCTGTTCAGAAAGTTGCTTTAGCAATATCACCATCGCAAATATGCAACAGTCGCCTAGGAGAAAATCTCTTGCCTGCTTCTCCTGAAGCTCGTACTCTTGCTCGCTGGATTTCTAAAAGCTATAGGTCCATACCATCGCTTGTTATCACATTTTATTTATTTTCTTTGGAAATTAAATTTGATATTGACCATATGTTTAGGTTTCATACTGGAGCAAGTCTTCTACGGTCTGAGTCTTTAGATGATGATACTTTGTTGGAAAACCTGTGGCGACATTCTGATTCCATCATGTGTTGCTCTCTTAAGGTAAGTTAACTAATTTCTTCACATACATCCTTGTTTTCAAAGAAAATTTGCAGTTTTTTCCTGCAAATATTTGAAACTTCTTTAAGGGTGATTTGACATAACATCCTAAAATGTACTTGCAGGCATCACCAGTGTTCACATTTGCGAATCAATCTGGACTAGACATGCTGGAAACGACACTAGTTGCTCTTCAAGACTTGACCCTAGACAAAATGCTCGATGACAATGGTCGCAAGGGGTTGTGTCAGGAGTTTCCTAAAATCATGCAGCAGGTTTTTGCGATTACACATTCATGCAATCTATATATAAGAATATGAAGTATTTTTTTACTTTTGTAATTTTTTTATACTAAATTATATAAAATGCTTGCAGGGATATGCGTATTTGCCAGGTGGGATATGCATGTCGAGCATGGGGAGGCCAGTGTCGTATGAACAAGCTGTAGCCTGGAAAGTTCTGAATGATGAGGAAGCGCATCATTGCTTAGCTTTTACTTTTGTGAACTGGTCTTTTGTTTGATTATGTATCTCTAGTTAATCCTATACGTTAGTATCATATTGTCTTATGTACTGCTGTATTTTGAAACGTTGTAGTCTTGCTACCTGTGTGTATTGTTGTCTTACCTTATGTTGTTATGTAATGTCTAGCATTGTATGCAGAAACAAAGCATGGTTTCGACCAGT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020273236.1	0.0e+00	homeobox-leucine zipper protein HOX32-like
Swissprot	Q6AST1.1	0.0e+00	OsHox32
trEMBL	I0IUI5	0.0e+00	Class III homeobox-leucine zipper protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G30490.1	69.80	0.0	1199	ATHB9;PHV	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC8G00145	AT1G30490.1	841	226	11	18	846	17	841	69.80	1199
AfisC8G00145	AT2G34710.1	844	217	12	18	846	21	852	71.09	1199
AfisC8G00145	AT1G52150.1	838	250	13	18	846	13	836	67.42	1153

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00046.26	Homeobox	Domain	23	80	57.3	9.1e-16
PF01852.16	START	Domain	170	377	153.6	4.2e-45
PF08670.8	MEKHLA	Domain	703	845	173.4	2.2e-51

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008289	F	lipid binding
GO:0009880	P	embryonic pattern specification
GO:0008284	P	positive regulation of cell proliferation
GO:0009733	P	response to auxin
GO:0009944	P	polarity specification of adaxial/abaxial axis
GO:0009965	P	leaf morphogenesis
GO:0010067	P	procambium histogenesis
GO:0010072	P	primary shoot apical meristem specification
GO:0010075	P	regulation of meristem growth
GO:0010089	P	xylem development
GO:0045597	P	positive regulation of cell differentiation
GO:0048263	P	determination of dorsal identity
GO:0048364	P	root development
GO:0080060	P	integument development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09338	HD-ZIP; homeobox-leucine zipper protein	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network