Detail information of AfisC8G00225
| Gene | Chr | Start | End | Strand |
|---|
| AfisC8G00225 | chr8 | 44832918 | 44856500 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_010939752.1 | 1.4e-76 | mediator of RNA polymerase II transcription subunit 6 |
| Swissprot | F4IXJ7.1 | 6.8e-60 | Mediator of RNA polymerase II transcription subunit 6 |
| trEMBL | A0A6I9S934 | 1.0e-76 | mediator of RNA polymerase II transcription subunit 6 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT3G21350.1 | 66.84 | 3e-70 | 261 | MED6 | RNA polymerase transcriptional regulation mediator-related |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC8G00225 | AT3G21350.1 | 187 | 53 | 3 | 22 | 201 | 22 | 206 | 66.84 | 3e-70 | 261 |
| AfisC8G00225 | AT3G21350.2 | 226 | 55 | 4 | 22 | 201 | 22 | 247 | 55.31 | 2e-65 | 245 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF04934.11 | Med6 | Family | 33 | 158 | 139.7 | 4.2e-41 |
| Accession | Ontology | Name |
|---|
| GO:0005515 | F | protein binding
|
| GO:0001104 | F | RNA polymerase II transcription cofactor activity
|
| GO:0003006 | P | developmental process involved in reproduction
|
| GO:0006357 | P | regulation of transcription from RNA polymerase II promoter
|
| GO:0007275 | P | multicellular organism development
|
| GO:0016592 | C | mediator complex
|
| GO:0044702 | P | single organism reproductive process
|
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K15128 | MED6; mediator of RNA polymerase II transcription subunit 6 | EC:- | - | - |