result

Gene information

Detail information of AfisC8G00621

Location

Gene	Chr	Start	End	Strand
AfisC8G00621	chr8	118293386	118295739	-

Sequences

CDS

Protein

Gene

>AfisC8G00621
ATGAATAAGAAACTTCATATATATGAATGTCTCAAAGTCACAAGTGCACAGAAGAAAGAAAGGAGAAGAAGAAAAGAAAAGATAAGAAGAAAAGAGATTTTAAGCAGTGCTATGTCGAACACAACAGCAGGTAAAACTTCAAGCTTTTCAGTGACATGCAACCTCTTGAGCCAATTCATCAAAGAGAAAGGCCGTTCTCCCTTAGATCTTAACCTTGCTAGGTCTATTGATGCTTCCATGGGTGAGTTTCTTTTTCTCCTATTATTATTCTTTTGAAGCTTTTTTTTCTCTCATGTTTTACTTGAATATTTACTTATTTAATTGGAATGTTTAGGCAAAATAGATGTTACTACGCATCCAAGACCGAGTATGATGAACCTATTAACAGGCGTAGATGTTTCCGAAACTGATTCGAAAAATAAAGTATCAGGTCAGACACCTGAGAAATCTATGGATTTGTTCCCTCAGCTTGTTGGTTTTGGGACAAAAGAAGATGACAAGAGGTCAGTATATCGGTTGATATTTGATAAGCTTTACCTTTTGGGTTGCTAAATAACTCGACTGTACTAATACAAGCAAATTATAAACCAAACCTTAGATTCAAGTACAGTGTCAACATCATCCTTGATTTTGGCATCATATTGCAAGTTAAGATGTACACAAGGAAAATAACATAAATGGTTAATTAATTAGCACTTAAATGTCAAATGGAAGAGCGTGTGAATCTCTTTTGTGTGTGTGTTGTGCTTTTAATATATTCAGCAAAGGGGTAAAACTAACTATAGTTACTTGTCCACTTCCACTCTAGCTAGAACCTTGGGTGAATGATTATGATGAGATAGCGTATAGTTAACATGAGTGTTCAAGAAAAATATTAACGAAGGAAAATGGAATTTGTCCTACATATACAGAAACAACTATTATGTTTAATATGTTACTGTATATAAGCATAAAATCCTCATATATAACTTTAATATGTTACTGTACATAAGATAGTGTATAGTCCACTCATTTTCTGCCCACTTTGTCCTACATATAAAGAAACAACTATTATGTTTAATACGTTACTGTATATAAGCATAAAATCCTCATATACTACCATGCACGATCAATGTAGGGAACAAGAGAACAGGCAATTAACAATATTCTACGCTGGCAAAGTGTTGGTATATGACAATTTCCCAACAGAGAAAGCAAATGATTTAATGACACTTGCACTCAAAGGAAGTGCCGCTACAAATGACCCTCCTGTCCCTGCACCCCCTGTACCTGTTCAACCTATCACTTTAGGAGCTGAGACTAAAATCGTCTTTTCAACTCCTCCATCTGTACAAACCATCCTCCCCCCAAGACCTGTTCAAACTGTTACTTCCGGTAGTTACTCTCTTCTCCATCATTTTCTTCTGTTAATTAATTACTTTAAACTTGATACCATATTCATATATTTTACACATGAATTTGTCCACATTTCGGTTTTGATATGATTGTAAAACAATAAGTTAGATATTGAAACTAAATTTAGGTCATATCAGCATGAGCTTGGTTTGGTTTGATCATAAAGATATAGTTTGGCAACGATGTTTTTGAACAATATATAGTTTGACAACACAGTTTAGATAGCATAATGTACAGTTAGGTATATGTCATCTAAACATATACTTGATAACTGAACATATTGATATGATATTTGTTTGACAACAGATCTTCCAATTGCACGCAAAGCATCGCTGCATCGATTCTTAGAGAAAAGAAAGGATAGGTAAGCAGCCAACTTCTACCTTAAATGTATTCATCAAGATCAAAAAGCTACAGCTGATTTTTGTTGATTTAATCTTGCTGTGGCTAATTGCATTTATTACGATACTGAATCTATACATAGGGTGAATGCAAGGGTACCGTATCATCAAGTAAATAAGGCAAAAGACTCTGCTGCAGAGAACCAGCCATGGCTTGGACTGAGTTCAGAGTGCAGCAAATGAAAGTTTTATGTGCTTTTTAATATGCCTCGATATATAACTTTTTGTAATCCTGATTTTAGTCTAGCTTCCGAACCTTTTTACTCTACTTGAAAGCTTGGTGTAAAAAATACATGTGGAGTCTTCTCTAGTTCGGCAGCAGTCTGTGTAATATGGATTACTAAGCATGATTGGATGTATCGGTTTATGGCTACCATTTAAAACAGAAATATGTATCGAGAAGACATACTAGTATGCAGTATCATTTTTTATCACACTTTTTATTATAAGAAAGAATGAGCGAAGTTTGGTGACATCTTTTTTATTGAGTTGCGCTGTCTCAACCGCTAAAAAGTTCTATGTATTTTTTCATATCATTTAAGGTTATCATTAATAAAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010937308.1	7.3e-37	protein TIFY 10a
Swissprot	Q84R94.1	5.8e-31	OsJAZ5
trEMBL	A0A8T3ARY0	8.1e-38	Protein TIFY

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G74950.1	36.05	4e-25	111	JAZ2;TIFY10B	TIFY domain/Divergent CCT motif family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G00621	AT1G74950.1	258	108	12	43	266	12	246	36.05	4e-25	111
AfisC8G00621	AT1G19180.1	252	127	8	44	271	18	252	33.33	1e-22	103
AfisC8G00621	AT1G19180.2	150	62	5	136	271	53	186	38.67	1e-18	90.1

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF06200.11	tify	Domain	139	170	53.3	1.1e-14
PF09425.7	CCT_2	Motif	225	249	51.2	7.2e-14

Gene Ontology

Accession	Ontology	Name
GO:0006952	P	defense response
GO:0009753	P	response to jasmonic acid
GO:0044424	C	intracellular part
GO:0044699	P	single-organism process
GO:0048583	P	regulation of response to stimulus
GO:0050794	P	regulation of cellular process
GO:0051716	P	cellular response to stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13464	JAZ; jasmonate ZIM domain-containing protein	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network