result

Gene information

Detail information of AfisC8G00782

Location

Gene	Chr	Start	End	Strand
AfisC8G00782	chr8	156046613	156048721	-

Sequences

CDS

Protein

Gene

>AfisC8G00782
ATGAACAAACAAAAGAACTATAAGAAATTAACTAAAAGTAAGGGACAAAATTATAGGATAGGAATTGAAAATGCACGAATTAACAAGTATCGGAGAACTGTAAATTACAGAGGATTGAACAAAAAAGATATACAAGATTTTACAAAGATAAATGGTAGAAATATAACAGTAGGAATTGAAATTGCAAAGTTAACAGAGTATGGAAATTATAAGCTACAAGCAACAAGAACTAGAAGTAAAATAGGTAAGTAATAATTAGAAACAAGAACTGCAAACTGTAAGGAGCGGGAATTTTAACAAATAGAGATTAATAATTGCAAAATAGGAACAAGGTTAAACTGAAAAGGAACTCAGATATAATCTAACTATTGACAAACCAAATACCAGATTAAAGGAAAAGACTGCTATAAAGATTGAAACTGAATGGAAAGAAATGAATTGAATTGCTTTTGATTTTTCACACTCTCAAATGACATATATAAGTGCTCTTATATATACAACCCATGCACAAGCATGCTTGACTCAACCGGACCCAGACTAACTCAGTCGGACCATACTCATATGCATACAAGCCCTTACATTATTCAACAATGCAAACTGAAAAAATATACAACACTTGCACAAACTCTGCTTGTATCAGGTGTGCATGTGCATAGTTTGCACACACCGATACACTCAAACCACTCACTCCTAAAGCCTTGTTTCCATCCATCACAGCCTTTGAAACCTGCCTGGAAGCCTCCAACTCCACCTCTGACGAACTGGCCACCATTCTCTGGTGAACTTGGCCTGAGTTTGCTGCCCTCTTCAGTTTCTGCCTGTAAATAGCAGCTTTTCATCTTCAAAACCACGACAACCAATCCTTGTGTGTTACACAGTAATGCAATACTTTAAAATCAGAGTGTTTTTTGATGATATCATATGCATTTTAACAGGTGAAAAACATGGCACTTTAAACTGGAAACAAAGATTTGATATAATAGTAGGAATAGCAAGAGGGATTGCTTATCTCCATCAAGAATTTCATGTCACGGTTATACATAGAGATATAAAATCTAGCAATATATTACTAGATGATGATCTTCAGCCAAAAATTGCAGATTTTGGTCTTGCAAGGCTTTTACCTAGTGATCAGACTCATGTCAGTACCGAATTTGCTGGAACTTTGTATGTCAAAATTTACATTTGTTTAATTTCACATACCATTTATGTATATATGCCTTTTTTTTATATCAATGTGTAAATTTATTATATGAATGCTATGACAGGGGATACACAGCGCCTGAGTACGCAATCCATGGCCAGCTATCTGAAAAGGTCGATACATACAGTTATGGCGTAGTTCTCTTGGAAATAATTAGTGGGAGAAAATCGAATGATCCAAGGCTTGAACTTGAATACCAGTACCTACTTGAATGGGTAATCTCTCTAATATGTTGCTGAAATTAGTACCTACTTGAATGGGTAATCTCTCTAATATGTTGCTGAAATTACTACATTGACATTAGTTTCATCTACATGATATAATATGAACAATTTTTTTATTTTCACAACTCTAGTGAAAACATATTCTTTTACGGAGGAAGTGCAGAAGCCTTAATCATGGTTGAGGTCTAAATTGGATTTGGATCATATGCTCTTTATTTGCACCAAAACAGGAAAACTAGTACCTGAATGGTTCACCACACTTGGTACTGAAAATGTACTAACTTTGCTAACATGTATCAAATGTGCACAAATGAGAGTTTCTTAACTTTGGTAGAATACTGGAGTAGGTGATCCAAATCCGTATAAACTAATTAATTTACCTTGATGCATGTTAAGGGCATATGCATAGAAAGATTCATTTTTTTATAATGATTGGTTGAATAGGCATGGAGATTATATAAGAGCCGTGAATTAGTAAAGTTAGTAGATGAATCTATGGATCCTAACGAATTCAATGAAGATGAACTAAAGAGAGTGATTGAAATAGCTCTACTTTGCACTCAGTCTATAGTAGCTGCAAGGCCAACTATGTCAGAAGTCGTAATATTACTCCTGAGCAAAGCAAGTCCCTCCGTTGTTCCAACGAGGCCTACTTTTATAGATGCATTGACAATTTGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	OAY63521.1	1.9e-88	Cysteine-rich receptor-like protein kinase 2
Swissprot	C0LGH3.2	5.6e-53	Probable LRR receptor-like serine/threonine-protein kinase At1g56140
trEMBL	A0A6P5FJM1	1.4e-88	cysteine-rich receptor-like protein kinase 2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G56120.1	47.93	1e-57	219		Leucine-rich repeat transmembrane protein kinase

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G00782	AT1G56120.1	217	111	1	70	286	785	999	47.93	1e-57	219
AfisC8G00782	AT1G56140.1	212	107	1	70	281	768	977	48.58	4e-56	214
AfisC8G00782	AT1G16670.1	194	82	2	72	265	127	314	54.64	1e-55	213

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	82	196	100.3	1.1e-28

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005509	F	calcium ion binding
GO:0042742	P	defense response to bacterium
GO:0005576	C	extracellular region
GO:0004674	F	protein serine/threonine kinase activity
GO:0004723	F	calcium-dependent protein serine/threonine phosphatase activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0012501	P	programmed cell death
GO:0009506	C	plasmodesma
GO:0009751	P	response to salicylic acid
GO:0010150	P	leaf senescence
GO:0010193	P	response to ozone
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network