result

Gene information

Detail information of AfisC8G00783

Location

Gene	Chr	Start	End	Strand
AfisC8G00783	chr8	156405339	156407788	+

Sequences

CDS

Protein

Gene

>AfisC8G00783
CAAAGAAGAAAAGAGAGGAGGAAAAGAAAAGATAACAAGAAAAGAGATTTTAATTAAGCAGTGCTATGTCGAACACAACAGCAGGTAAAACTTCAAGCTTTTCAGTGACATGCAACCTCTTGAGCCAATTCATCAAAGAGAAAGGTCGTTCTCCCGTGGATCTTAACCTTGCTAGGTCTATTGATGCTTCCATGGGTGAGCTTTTTTTTTTCTTTCCTATTATTATCGTTTTGAAGCTCTTTACTTCATGTTTTTCTTGAATTTTTACTTATTTGATTGGAATGTTTAGGCAAAATAGATGTTGCTATGCATCCGAGACCGAGTACAATGAACCAATTATCAGGCGTGGATGTCTTCGAAACAGATTCGAAAAATAAAGTATCTGGTCAGACACCTGCCAAATCTATGGATTTGTTCCCTCAGCTTGCTGGTTTTGGAGCAAAAGAAGACGACAAAAGGTCAGTATTTGGGTTGATATTTGATAGGCTTTACCTTTTGGATTGCTAAATAACTCGACTGTCTTAATACAAGCAAGTTATAAACCAAACTTTAGATTCATGTAGTGTTAACACCATTCCTTGATTTCATATTGCAAATTAAGGTGTACACAAGGAAAATAGCATAAATGGTTAACTAGACCTCGTTAGAAATTTTAGGAGAATCTTTAAGCTCCGATATAAATATTAGAAATTTTAAAAGAAGAAAAAGGAGATTGAGAGACGAATATTTGATAAGAAGAAAATAAACTTTATTTTTAGCAAACTTTTCTTCAAACTTCGGGTTTCTAACTAAATTTTTCTTGACAAAACATTTTCTAAATTCTTCAAATTACATATTTGATAAGTCTAAATTTTTCTCCATTCTTAATTTTGGCATTTCCTAAATACAAAATTAAATTTGCAACAGAATCGATATTTTTTTAAAAACAAGTTTATTTCCAACAGCACTTAAATGTCAAATGGAATAGCTGTCAATCTCTTTTGAATAACCTGAAACAGATATCCTGCATCTATGTTTGATGCATGTCGACATCTCAATACACACAGAGTTTGCTTTTAACATTAACGGGGTAAAACTAACTATAATTACTTGTCCACTTCCTCTCTAGCGAGAACCTTGGGTGAATGATTATGATGAGATAGTGTATAGTTAACATGAGTGTTCAAGAAAAATATTATTCAAGGAAAAAGGAATTTGTCCTACATATACAGAAACAACTATCATGTTTAATATGTTACTGTATATTACTATATATATATAAGACAGTGTGTAGTACATTCATTTTCTGCCCACTTTGTCCGACATGTCCAGAAACAACTATTATGTTTAACATGTTACTGTATATAAGCATAAAATCCTCATATACTACCATGCATGATTTATGTAGGGAACAAGAGAAGAAGCAATTAACAATATTCTACGCTGGCAAAGTGTTGGTATATGACAATTTCCCAGCAGAGAGAGCAAATGATTTGATGGCACTTGCAGGCAAAGGAAGTGCTGCAACAAACGACTCTCCTGTCCTTGCACCCCCTTCACCTGTTCAACCAATCACTTTAGGAGCTGAGACTAAAATCGTCTTTTCAACTCCTCCTCCATCTGTACAAACTATCCTCCCTCCAAGACCTGTTCAAACTGTTACTTCCGGTAGTTACTCTATTTTCCATCATTTTCTTCTGTTAATTAATTTCTTTAAACTTGATACCATATTCATATATTTTACACATGAATTTGTCCATGTTTCGGTTTTGATATGATTGTAAAGCAATAAGTTAGATATTGAAACTAAATTTAGGTCATATCAGCATGAGCTTGGTTTGGTTTGATCATAAAGATATAGTTTGGCAACAATGTTTTTGAACAATAGTTTGGCAACACGGTTTAGATATAGCTAGCATAAGGTATAGTTAGGTATATGTCGTCTAAACATTTACTTGATAACTGAACATATTGATATGATATTTGTTTGACAACAGATCTTCCAATTGCACGCAAAGCATCGCTGCATCGGTTCTTAGAGAAAAGAAAGGATAGGTGAGCAGCCAACTTCTACCTTAAATGTATTCATCAAAGATCAAAAAGCTACAGTTGATTTTTGTTGTTTTAATTTTGCTGTGGCTAATTGCATATATTTATGATACTGAACATATAGGGTGAATGCAAGGGTACCATATCAAGTAAATAAGGCAAAAGACTCTCCTGCAGAGAACCAGCCATGGCTTGGACTGAGTTCAGAGTGCAGCAAATGAAAATCTTGTGTGCTTTTAATATGGCTCAATATATAAATTTATGTATTCCTGACTTTAGTCTAGCTTCCAAACTTTTTTACCCAAATTGAAAGCTTGGTGTAAAAAATACATGTAGAGCCAGTTGGGCAGCAGTCTGTGTAATATGGATTACTGAGTATGATTGGTTGTATCAGTTTATGGCTACCATATAAAATAGAAATA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010937308.1	8.2e-37	protein TIFY 10a
Swissprot	Q8H395.1	7.7e-32	OsJAZ6
trEMBL	A0A8T3ARY0	2.8e-39	Protein TIFY

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G74950.1	34.94	2e-25	112	JAZ2;TIFY10B	TIFY domain/Divergent CCT motif family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G00783	AT1G74950.1	249	123	9	6	229	12	246	34.94	2e-25	112
AfisC8G00783	AT1G19180.1	262	112	10	7	234	18	252	33.97	1e-23	107
AfisC8G00783	AT1G19180.2	147	63	6	99	234	53	186	40.82	7e-19	90.9

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF06200.11	tify	Domain	102	134	55.9	1.7e-15
PF09425.7	CCT_2	Motif	189	214	52.0	4.2e-14

Gene Ontology

Accession	Ontology	Name
GO:0006952	P	defense response
GO:0009753	P	response to jasmonic acid
GO:0044424	C	intracellular part
GO:0044699	P	single-organism process
GO:0048583	P	regulation of response to stimulus
GO:0050794	P	regulation of cellular process
GO:0051716	P	cellular response to stimulus
GO:0097659	P	nucleic acid-templated transcription

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13464	JAZ; jasmonate ZIM domain-containing protein	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network