Gene information

Detail information of AfisC8G00935

Location

Gene	Chr	Start	End	Strand
AfisC8G00935	chr8	187588162	187588673	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	CAA64221.1	2.1e-35	homeobox-leucine zipper protein
Swissprot	Q05466.1	4.1e-36	Homeodomain-leucine zipper protein HAT4
trEMBL	Q40782	1.5e-35	Homeobox-leucine zipper protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G16780.1	78.79	2e-40	160	ATHB-2;ATHB2;HAT4;HB-2	homeobox protein 2

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G00935	AT4G16780.1	99	19	1	11	109	110	206	78.79	2e-40	160
AfisC8G00935	AT5G47370.1	111	33	1	3	109	97	207	66.67	2e-36	147
AfisC8G00935	AT5G06710.1	105	28	2	6	109	164	267	71.43	2e-36	147

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00046.26	Homeobox	Domain	31	85	58.1	5e-16
PF02183.15	HALZ	Family	87	108	28.1	1.6e-06

Gene Ontology

Accession	Ontology	Name
GO:0000123	C	histone acetyltransferase complex
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0008283	P	cell proliferation
GO:0009506	C	plasmodesma
GO:0009585	P	red, far-red light phototransduction
GO:0009641	P	shade avoidance
GO:0009733	P	response to auxin
GO:0009735	P	response to cytokinin
GO:0009826	P	unidimensional cell growth
GO:0010015	P	root morphogenesis
GO:0010016	P	shoot system morphogenesis
GO:0010218	P	response to far red light
GO:0010321	P	regulation of vegetative phase change
GO:0010484	F	H3 histone acetyltransferase activity
GO:0010582	P	floral meristem determinacy
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0016573	P	histone acetylation
GO:0042803	F	protein homodimerization activity
GO:0043565	F	sequence-specific DNA binding
GO:0043621	F	protein self-association
GO:0048467	P	gynoecium development
GO:0080127	P	fruit septum development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09338	HD-ZIP; homeobox-leucine zipper protein	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network