result

Gene information

Detail information of AfisC8G00978

Location

Gene	Chr	Start	End	Strand
AfisC8G00978	chr8	196055342	196060529	+

Sequences

CDS

Protein

Gene

>AfisC8G00978
ATGCCGGAGTTGCGAAGCGGAGTTCGTTTGAGATCTAAGGAAGCAGAATATATAATTCCAATCCAACAAAACCCAGACAGCCAGAACTTACCTATCCCAGCAACTATCAACAAAAGAACGACAAGGCGAGGAAGGGGAAGAGGAACTAATGCCCAACCAGTAGCTACTACAAATAGGAGAACTGGTGGTAGAGGAAGAGGTATCAAAATAATCGACTTGGATCCCGATCAGCCTTGTGAAGCTTTACCTAGAGTTAATATTGGTGCCGGGGGACGCAAAATATTGAACCAAGAAGGCGAGTGTGCTGGTGAAAGAGACGTTCCAATGAATGGTATTGGAGATAAATTGGTTGGGGATGATGATTCAAATTCTGCTCCGGTGCCTGATAGAGTATGAATTAATTGCATGCGGTTTTTAATTTAATTAATTATTGCGCTTTATTCGGATTCAGATTTTGAAGTGGCTCATGCAAGATATAGTTATATATAATCATGGAACTTGATGTTGGCATGCAGTTACACTTTGTGCATACTAATTTTTTTTATCTATTTGATGTTGTCACTTAATGTAAACAAGTATGTATAAATGGACAGCGAGCTGTAACCATTTATCTCAATATTTTTTGTAACAATTGTTACCTTGTAAAGGTTCTACTGTGATTGAGGTCTTCTTGAAAATTACTCCACCAATTTCATTTTATGATGTAGTTCCACACCATTATCAGCACATCGCAAATTATGGCCATTGGCCATGAAAGCATGCTATAAAAATAACAAGGGATGAGTTGAGCTTGTATGCAATTTGAATTGTAATTAGCACTATGGCATGTAGCGTACATAAATCATTGTCCTAGACAATTTCTACCCTTTGGGCAGCTTACATCATTCAATTTGGACTAAATAGCTACATTTTACTGTCTCCGATGTGTAGGTTCAAGTAGGGAACTCCCCTGTGTATAAAGTAGATAAGAAGTTGGGAAAAGGTGGCTTTGGCCAAGTATATGTTGGAAGAAGGGTAACTGGTGGATCAGGACGCATTGGGCCTGATGCCTTTGAGGTCAAATGAAATTTGTTTTTTGATGATGGTCAACTTTTTTGGGATTTACAAAATAAAAAATTATTGTTTATTGATGCTATCGGATATGGTTTATCTTTAGGTGGCGCTGAAATTTGAGCACCGTAGCAGCAAAGGTTGTAATTATGGCCCACCTTACGAGTGGCAAGTCTATAAGTAAGCAATTGATGTCAGCATAATTATACAAGTTTCTCTTTGTTGTGACTATTATATCTGTATGTCTCAATCAATATTTTTATATTTATTAAGCACTCTCAACGATTGTTATGGAATACCGGGTGTTCATTACAAGGGCCGACAAGATGATTACTACATTTTGGTTAGTTCAACAATCTTAGGAAAGTTTAAGCCGTCAAATATGTAAATTATCTGTTAAATTTGGTTCCCAGGTTATGGACATGCTTGGACCTAGTCTTTGGGACATATGGAATTCTGTCAACCAGTCGTAAGCACATATATCCTTTTATGCTTTACAGCAAAGTGTTAACAATTTGATTATGAATGAACTTATATCTCTTATATTACCTTGGGCTACTACGTCAGCTGATACTTGTTCGGTAAATGTATTCTCTAGTCTGGTCGGATAGCCTTTTATTTTGAAGTAATGTTAGTTCTTCTAATTAATGACTGCTGGAACAGGATGACAGAAAACATGGCAGCTTGCATCGCCGTAGAGGCTATATCCATTCTTGAAAAGCTTCACATGAAAGGGTGCATTATTGTTGTTTTTGCTAATATGTATTGTGAATTTAACACGAAGTTCACATTTTAAACATGAATAAAATTCTGAGTGGAGCCTGCCATTTCGTTTTAACTTTTTTGGCTAGGTTTGTACATGGAGACGTTAAACCAGAGAACTTTTTGCTTGGTCAGCCTGGAACTCCTGACGAGAAAAAGCTGTTTCTCATCGACCTTGGTTTGGGTATATTTGCATCGATTTTGTCTTTTTTTTTCCAGAAGAAAAGCCCTTCCTTCAACTTCAACTTCATATTCCTAATCCAGCACCATCCATATTTATGTATTTCAGCTTCTAAATGGCGAGAAGTGTCAACTGGTCTGCATGTTGAGTACGATCAAAGGCCAGACATTTTCAGGTATAAAATCTTTGTTACTGATTTCCATTTAACTTTCTGTACAACTTATAATGTGGTTTTATCTTTTTTTGTTTTTGTTTTTTGAGAGCAGGGGTACAATAAGATATGCTAGTGTACATGCACATTTAGGTCGTACTGGAAGTAGGAGGGATGATTTAGAATCATTGGCATATACACTTATATTTTTAATGAGAGGAAGGTTACCTTGGCAAGGATACCAGGTAACACTTTAATTCACATCAGTATATCACACTTTAATTGTGAATCATTTCTTACAATTCAATTTACCGACACATTGTTTATGGTATGTGATAATGCAGGGAGATAACAAGAGTTTCCTTGTTTGTAAGAAAAAGATGGCCACTTCCCCAGAACTGCTGTGTTGCTACTGCCCAGCTCCATTCAAAAATTTCCTTGAAATCGTGACAAACATGAAGTTTGATGAAGAACCGAATTACTCCAAACTAATTTCTCTTTTTGATAGTCTGATTGACCCATGCATTCAATTAAGACCAATTAGAATCGATGGAGCTTTAAAGGTATATCGATACTACAAATATTACACCAACCTTTGGAGCAGATCCTAGTTTATCTGTGGTGATATTTAAAATTCCATTACATGCATATAGGTTGGGCAGAAGCGAGGTAGATTGGTTGAGGAGTACGCAGATGATGGAGCACATCCTAGAAAGAAAGTGAGATTGGGAAGCCCTGCAACACAATGGGTATCAGTTTATAATGCAAGACGACCGATGAAACAGAGGTAAATACATAATAATATCTTTTTTTAATGCTGAATTTAAGTTGATATTTTCAGTGGTGCAAGCGAATGCAATACTCTGACAGTAATATGTAATTATAAGATAGAAGTGAATGCTATACTGGATAACTATGTCATATTGCTGTTACTTTCACGTTCTAGTTTGTCCGATCCAAATATTTTAATCAAATTCAATACTTTGAGGAAGCACGGAATTTTGATAAAGGGTGGTATTTCTACCCAATTTTGGTAAATAAATTTATGCATTGAAGTGTTTTAGCCCTGAATATAACTTTTAGAGGCTGCTTATCCATTCTCTTTGTATTGGCCACATCAAGTGACACTATCCATCTCTTTTCTACTACATAAAACAGTAACAGAACACGAACTCATGTTAGACATGATGTATTTTATCCTTGACTGTATTGTTATGCACTTATGCTTTAAGCTTCAACATCAACCGGATTTTTGATATTAAAAAAATGACAATGCATAATTGTTGCAAGGTACTTTTGTTTGATATCATTGTTATATTTTTACAATTTTATCTGCTGGAAAGTACATATTTGATGAAACTATCTACTTCTTTAATACAATCTAGTTAAACAGTATCAGAGATTGAATTCATGTAAGCAATGAAGCCTATGCCTATTTGACTGCACAAGCTATGCTTCTAAATTTAACATCAACTAGATTCCTGACAAAAGTTTAATTTTTGACATATATGTACTTTTCAACCGTTAATCACAGATTATATGTATATAGTACTAGCAATTACTGGTTTGCTAATTAGATTGTTCAACAGGTTTGGTAATGAACCTCTTCTCTGTGTTTCTTTTAACATTTATCAATAAGAAAGCACATAATTACATACATCTCCCACGATAATACTATATAATTCCTAATTAACTCATCCCGGGCCTAATCTTTAGCTTAACATTTTGTTGTACTTCTATAGATACCACTATAATGTGTCGGATTCGAGATTCTACCAGCATGTAGAGAAGGGAAATGAAGATGGTTTGTACATAAGCTGCGTAGCTTCTTCAGCAAACCTTTGGGCTCTCATTATGGATGCAGGAACTGGGTTTTCTGCTCAAGTTTATGAGCTGTCTCCTGTATTCCTGCACAAGGTATGTTCTGTTGAATATGTATTTTATTTGCTGTTATTTACGTACCATTTGGTTCTGTCATAGGACTGGATTATGGAGCAGTGGGAAAAGAATTATTATATTAGTGCCATAGCTGGGGCAACTAATGGAAGCTCGTTGGTTGTGATGTCAAAAGGTATGCTGTGTATATTCAAATTCCAGATACTGTATCAATTGACATTCATTGCATATCAATTCCATTTTCTTTATATAATTATCCTAAAATGCTCTAAACCCTTTCTTATCATCATTGTTGCATGCTGTAACGAATGTGGCATTGTTATTTTTGCATCCATTTATCGTATAAGTTGGCTTATATGGAAATAGGGAAGGTCATAGATATGAATGTGCTACTGAGTAATTAGGATGAATGTGTATTACAGCAATGATGTCTTGATCCTTACTATGTACATTCTGTTATATGGTGATGTGGAGATTTTGTATCCAGTATCCAACAAGCTTAGTTGTGAATTACTTAGCAAAGTGAAATAAAATAATGTTTAACTTCCAATCCCTGTTTATTTTATATCATGTCAGATCAAGAAATAACATAGTGCATTATCTATTATGGTAAAATATGTACTTCCTATCTTTGAGACACATGTTTGTTTTTATACCATTGCATAACATTATTGTGGTAATCATGTTCGATAAGAAACCGTTTTTCCTTTTTTTTTTGCGATAATAATTTGTCGTTGGCAGGGACCGTTGTTCTACTGGTAATACAAGGACAATGGTAAGACACCTAACTAGAGTTGTTGCTAGAGGTCTCGGGTTCAATCCCTTAAACATACATTAGGGCCAACGTTCAAAATAGTGATAATAATAATTATAATTAGTCATTTGTAACTGCAATCATGCTTTGTAAAGGTATACTAACTCAATTATCACTAGATGTTGAACTTTTATGCCTTTATTTGATATGAAAAACATGCATGCTTGTGAGGAAAAGGGCTGTCACTCTGATGACCAGTACTATATTTAGCCATTTATGCTTTGAAACAAAGTACTAGCCTATATATATATGAAAATATATTTTAGGGAACTTTAATTACCTTATGGGCATGGGTAGGTGGATGGGTCAGTTGAGTTGCGGTGGTAACCTATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020589224.1	6.4e-256	casein kinase 1-like protein HD16
Swissprot	Q852L0.1	2.8e-240	Protein HEADING DATE 16
trEMBL	A0A6I9QHG0	6.6e-255	casein kinase 1-like protein HD16

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G03940.1	72.63	0.0	845		Protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G00978	AT3G03940.1	570	152	4	1	568	1	568	72.63	0.0	845
AfisC8G00978	AT3G03940.1	84	57	2	481	563	575	656	28.57	2e-06	51.6
AfisC8G00978	AT5G18190.1	570	151	7	1	568	1	558	71.05	0.0	820

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	139	374	63.6	1.6e-17

Gene Ontology

Accession	Ontology	Name
GO:0000139	C	Golgi membrane
GO:0000287	F	magnesium ion binding
GO:0001948	F	glycoprotein binding
GO:0002121	P	inter-male aggressive behavior
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0005694	C	chromosome
GO:0005813	C	centrosome
GO:0005847	C	mRNA cleavage and polyadenylation specificity factor complex
GO:0006281	P	DNA repair
GO:0006461	P	protein complex assembly
GO:0006909	P	phagocytosis
GO:0007030	P	Golgi organization
GO:0008360	P	regulation of cell shape
GO:0010467	P	gene expression
GO:0010906	P	regulation of glucose metabolic process
GO:0016607	C	nuclear speck
GO:0018105	P	peptidyl-serine phosphorylation
GO:0022008	P	neurogenesis
GO:0030177	P	positive regulation of Wnt signaling pathway
GO:0030178	P	negative regulation of Wnt signaling pathway
GO:0030877	C	beta-catenin destruction complex
GO:0032091	P	negative regulation of protein binding
GO:0032436	P	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042277	F	peptide binding
GO:0043278	P	response to morphine
GO:0044822	F	poly(A) RNA binding
GO:0045095	C	keratin filament
GO:0045104	P	intermediate filament cytoskeleton organization
GO:0045879	P	negative regulation of smoothened signaling pathway
GO:0048511	P	rhythmic process
GO:0051219	F	phosphoprotein binding
GO:0060069	P	Wnt signaling pathway, regulating spindle positioning
GO:0060828	P	regulation of canonical Wnt signaling pathway
GO:1903827	P	regulation of cellular protein localization
GO:1904424	P	regulation of GTP binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network