result

Gene information

Detail information of AfisC8G02021

Location

Gene	Chr	Start	End	Strand
AfisC8G02021	chr8	402163503	402164789	-

Sequences

CDS

Protein

Gene

>AfisC8G02021
ATGGGTGGAAGTACTCCTTGTGCATCTTGCAAATTGTTGAGAAGAAGGTGCACAGAAGATTGCATATTTGCTCCTTTCTTTCCTTCGGACGAGCCTCACAAATTTGCAATTGTTCACAAAGTCTTTGGTGCTAGCAATGTCAGTAAGATGTTGCAGGTTAGTTTCTCTTGGATACTAAAATGGTTTTTACTTTTTAATAATATTGTGTGCTTACATTTTGATTTACTTGTACATATATATATGTTGCAATTACAGTTAAGCAGATATCTTCTTCATCTGATTAACAGCACAGCCATGTCATGAAATAACTATTATAGTTGACATGAACTTGCTGTTCATCAGTTTCAGTGAACTGTTAGTGCTAAGCTTAAACATTGTACTACATTTGCATGAACAAAAATGCTACTATGATAAAAAATTTGTTCTGTCAAATTGTACATCACAAACAAAGTTTTAGTGGGGACTACTAATCAAACTACCAAATTGCCTTCTGGATTCCTCCAATTACTCTATTTTTACATTTTGACAAGAATTAGTTTATGTCATAGTAGCAAAATCCTTGCATGAAAGAAGATTTATGTTGTACATACTTTATATTGATAGAACAGAAAATTCACTCTTTATTTGATCATTGTTTTATTGCCGTATGAGTGTCAAAATATCAATTGCATGAAATGCAGTTACATGGTTTTGAAGATCTTTGCCACTGAATCAAAATGAGATGGATGTAATTTGTTTGACATCTGAACCTGAACCTACATGTAATATGTATGAAATTTGAACCTGAATCTCCATGTAGTTTATGAAAGGTTCCTTAAGTAGAATTTTTTTCCTCTAAAAAAATACATAGGGTACTAGAAACAGAGAACTGCGGTTTCATGTGCAATACTTTTGTTTTTTATAGTCAAAATTTTACAACCAGTTAACTAAATGATCTTTGATTTTCAGGAAATTCCATTCAATCAAAGGGGAGATGCAGCGAGCAGCCTTGTCTACGAAGCAAATGCAAGAATTAATGACCCAGTTTATGGATGTGTAGGACCAATTTCGTACTTGCAAAATCAAATCTCTCAGCTTCAAATGCAACTGGCTGTTGCTCAAGCAGAGGTTTTATGCTTAAAGATGCAGCAAGATCATCATTTACCCGATGACAGTTCTTTCATTTTGGATGATAATTTCTACCAAAATATGAATATTTGTCAACTTCTGAACTTAGCTTCAAGTTCCAGCAGCAATAACGTAGAATCTCAGGCTGATTTCTATAAGATGGAATCACTTTGGACTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	MQL90013.1	5.9e-58	hypothetical protein
Swissprot	Q8LBW3.2	4.4e-50	ASYMMETRIC LEAVES 2-like protein 5
trEMBL	A0A843VBU5	4.2e-58	LOB domain-containing protein (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G30130.1	78.15	1e-52	202	ASL5;LBD12;PCK1	Lateral organ boundaries (LOB) domain family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G02021	AT2G30130.1	119	21	1	3	116	5	123	78.15	1e-52	202
AfisC8G02021	AT1G31320.1	117	37	0	2	118	9	125	68.38	7e-41	162
AfisC8G02021	AT1G16530.1	138	55	3	5	135	13	150	55.07	3e-39	157

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03195.11	DUF260	Family	6	103	145.2	5.6e-43

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0016020	C	membrane
GO:0005739	C	mitochondrion
GO:0005654	C	nucleoplasm
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009536	C	plastid
GO:0009799	P	specification of symmetry
GO:0009867	P	jasmonic acid mediated signaling pathway
GO:0009944	P	polarity specification of adaxial/abaxial axis
GO:0009954	P	proximal/distal pattern formation
GO:0009965	P	leaf morphogenesis
GO:0010199	P	organ boundary specification between lateral organs and the meristem
GO:0048441	P	petal development
GO:1900150	P	regulation of defense response to fungus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network