result

Gene information

Detail information of AfisC8G02193

Location

Gene	Chr	Start	End	Strand
AfisC8G02193	chr8	434013998	434015563	+

Sequences

CDS

Protein

Gene

>AfisC8G02193
ATGGTAATCTAAAGAGTTATTAATCCAATATTTTTTTATACTTGAAAATGGAATATAATTTTATGATTTATGATTCGAATCACATTTTGAAAACCTATATTTCTTTTTTATCATTTACAGGCTGAGAATTGTGGTGATGCTGAAGTTATATATTCATTTCTTGAAGTGAATGAAATTGGACAGGTTATTCAGCGTTTTATACGGCTTATGAATTGCATATGGAATCAAAAAATAAACTTAAAAGAGCTGATGGTATTTTAATCTTGGGACTGCTAGGTAAGCTTCTTCTTTTAACTTCAATTGTAAATTATGTCTAATGCTAACAATATTTACTCGTTGAAATAGTAGAGCGAAACCACTGGAAAAATCAAACGCTGCATATAAGAAATTTCTTGTAAGATCGACTAGAAAGAAGGCACTCACTGAAGTAAGTTTATTTTTTTTATCGATGATTTGATTTAGTTAAATTTGTTGAAGACATTCACTAAAGTTTGTCAAATTCTTTACCAATATGTCATTATTAATGGCTTTGGTGTTTTAGGATAATGCAACTGACAATGATATGCCAAATAGAAGCTTTGGAAATGTTATTGCTACTAAAGGAACTAGTAAGTTTTCTATAAAATTAATTATATTATGCTAGTATTATGATTGTTTATAAATATAATAAATCAAAATGTTTTTCATTTAGGAGTACCACTTTCAAAGAATTTTAGTCACCCGAAAAAATGTTTGTATCTAATAAGGTGACTATTAATCTACATTTTGTTAATAGAAATTTTCTGTAGTGTATTGCCTTAATTGCTTTCATATTAGCATTTAGCATAATGGAAAACAACTTGACTTCTTGTTCAATTACAAGATGAGATCCTTCTTGAGCTCCTTCCATTTTTTCTACTTTCCATGAATTATAAATTCACAGTCCTACTAATGCTGTAAATATTTTAGAAATAAAGCTTTTAGTTTACTAGTGTGTTCTAGTTCATGACTGTAGTAATTCTTTCTGTACCATTGGATAAGCTATCTCTTATTCAAGTAAACATTTTTATAACAGTGACAAGAAAAATCACAATAAAAGCAGATGTCTTCAGCTTTGGGGTGGCGCTAATGGAGCTCATAATGGGTCTAACCGCTTTAGACGAGAGCAAACCTAAAAAATCCCGTTATCTTGCATTATGGTTCATCGAAAAAAATTCCAACATATAAACTCTCAAATCATCAGTAGACCTATCAATGGAGCTTACAGAGGAAACATTTGAAAGCATACAAATAGTAGCTGAACTCTCTGGGCACTGTGCAACAAGAGAACCATATCAAAGACAAGAGATATGTCATATAGTTAATGTTTTATCGCCTCTTGTAGAAAAATGGACGCCATCAAAAGTAAAAGCAGATGAGTGCTTAATTGTGGATTTGCAGAAGCCTTTGCCTCAATTGGTTAAGTCTTGGGAAAATTATGAAAGCCAGAATGTGAGTTTTACAAGAGGAGTTGATGATAGTCAGGGTAGTATTCCCGTTAGACCCTCAAATTTCAGTCAGTCTTTTACTTCTTCTAATGGTCGGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	GAY62779.1	9.4e-29	hypothetical protein CUMW_220500
Swissprot	P43298.1	4.0e-24	Transmembrane kinase 1
trEMBL	A0A067F4Z4	6.8e-29	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G66150.1	45.53	9e-26	112	TMK1	transmembrane kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G02193	AT1G66150.1	123	61	1	42	158	820	942	45.53	9e-26	112
AfisC8G02193	AT2G01820.1	128	65	1	40	158	816	943	42.19	8e-25	109
AfisC8G02193	AT3G23750.1	117	63	1	45	158	812	928	43.59	9e-23	102

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
-	-	-	-	-	-	-

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0005794	C	Golgi apparatus
GO:0009505	C	plant-type cell wall
GO:0009506	C	plasmodesma
GO:0009555	P	pollen development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network