result

Gene information

Detail information of AfisC8G03354

Location

Gene	Chr	Start	End	Strand
AfisC8G03354	chr8	628365987	628368939	+

Sequences

CDS

Protein

Gene

>AfisC8G03354
ATGGAAGCTGAAAAGATCATAAGCCAGCATTATGAAGTCACCAAACAACTACAGAATGCAAACAAAAAGTTATTGGAATTAAAAATCCACATTGACGATTATGATTGTGCATTAAGAAGTTCTGAAGTAAAAAGTCAAACTTCTCAACAGCTCTACGAAGCGCTGAAAGTGGAACATGAGAAACTGCAACAACAAAGAGATGCTACAGTAAAAGAAGTTGAGGATTTACGTAGATGTCAAGCAGCCAACAAAAGTGGTACTGTAGCAAATTTCTCTGAGTTCTCCTTTCCGGAGATTGAGTTGGCAACTCATAGTTTTAGTGATTCACTTAAGATCGGAGAAGGTGGATATGGAAGTGTTTATAAAGGCTTTCTTCGGAACACAGCAGTGGCTGTAAAAGTATTAAACTGTGAAAGCATGCAAGGTCAATCAGAATTTCATCAAGAGGTAAGTACATCATCTGACTCTCATGTTAAGGCATTATATATTAGATATTCAGTGTTCACTAATTTTCCATATTTTTATATGGTTTCTAATTATCCAAAATAACCATGGCATATATGACATCTTAACAACAAATATGAAATAGTTAACAATGCAAAACTACTTGCCTGTTCTAGGAGTTAATTGTTCATTACATGGAAAGATACAAATAACAAAACTACAAAAGTAGCTATCAACCAAATTAAAACTACCAAAAATAACATAAACAATAACATAACAATGTTAATTTATTGTCCTAATAAAAAGGGGTGCGTGCACACACACCCACGTCCCTTTAGCACCTCTATCAAATTTGAGTTACACGATTTTAATTGCTATGAAATTTCGTAGATGTTTAATCCACATTATGCATATCATTTTTACAATATATGAGATCGTTTTGAAATTTCTAACCTCATCAAAATGATAAGTCGATATTGACCATTAAACATTTATTTCATCCGTTGGTTTGAAACATTAAGTTTATCGTATTATGTATATTTAAATGCGCTCAAATTTTGTGGAGATAATCTTGAGTATGATATGAACATATCCACAGAATTTCATAGCATTTATAATCGTGTAAACTCAAAATATGATAGGGTTGCGCCAAAAGATAGGTGTCATTGAACCTTCACTCATCTTTTGGAGCACCCATTTAACACCTCTATCATATTTTGAATTACACGGTTTTAAATGAATATGAAATTTTATAGATGTTTAATCTACATTATGAATATCATCTCTATAAAATATTATATCATTTTGAAATTTCTAACCTCGTCAAAATAATAAGTCAATATTAATCGTTGAAATATTTAAGTTATTCGTTGGTTTGAAACATCAAGTTTATCGTGTTATGTATATTTCAATACACTCAAATTTTGTGGAAATGATCTTGAGTAAGATATGGACATATCCACAAAATTTCAAAACTTTTGAAATCGTGTAACTCAAAATATGATAGAGGTGCTCAAAAAGTGGTTGCCATTTAACCTTTCTCTACACACACATGGATAAAGCGGTCATTTATTTTAGGAAACCACTCAAAAAAATGGTATATTTATGAATATTTTTATTTGTTTATTTCGACACTCAAGTACTATTGTGTACCTTGTAAATATTAATCCATGATTAAAAATCCAGACACAATGAAAGATATACTCTGCTTTATTCATCGGCATGGACTCAATTATCTTCATAATATTACGATTTCTTAATACATTGCTCTCTTCTAATTTTGAGACCTTTAGTACGCATGTGAAATAAAAGTTTATATGCAGCCATAAGTTATCTGGACCATTTTGTCAAAAATCTTGAAATTTTACAATTTAAGTCCCGTTTCAATTCGAATCTCTCTAGTTACGATTTGATACTCATATTCTGATTCAAAACTTAACTAAAACTGTTATTGAGAAAAATCATTTGGTCCATGTTGAAATAAATAGTATCAAAATGCTGATTTGAATCTACAGTTAAAATTTTATCATTTTTAAGCAAAATAAAGGTAAACATGAGAAAAGGTTAATTTTTTGATTCAGATATAGAAGCTCAATAACCAAAATCGATCTCTAAAACCTAAACTATTACTATGAAAAAAAGAATATATGTTTTTGCATACTTTAAATATTACTAGCTAACCTATGTAGCTTAAGGAAAAAAACATATTAGAATACAAAATCATTTGAATCTACGATTTAAACCTGGTTTCGACTCAAATTTTAAACTTAATTATTTAGGATCCTTAAACAGCTGACTTTTTCTCATCTTGCCATTGTAGGTGAAAATTCTCTCTACGGTAAGACATCCGAATCTCATTACCCTAATAGGTGTATGCTCCGAAAAATTTGCTCTCATATACGAATTTCTCCCAAATGGAAGCCTAGATGATCGTCTTGATTGCAAAGACGATACGCTTCCATTAACCTGGCAAACCCGTACCCGTATCAGTACTGAAATATGCTCTGCTCTAATATTCCTCCACTCCAGCAAACCTCACCCAATCGTTCATGGCGACCTCAAACCCGAAAACATTCTTCTTGATGCCAATCTTATAAGTAAACTTGGAGACTTTGGCATTTGCCGACTTCTAACTCAATCAACTGCTACATCTCGTACTCTTTTTCACCGGACAACAGTTCCTAAGGTTACATATGCATATATGGACGTTGAATATGTCAGGTCAGGCAAATTAACGCCGCAGTCTGATGTGTATTCCTTTGGTATTATACTTCTAAGGTTGTTGACAGGGAAAGCAGCAATTGGGATTGTTAAAGAAGTGAAGGATGCTTTGGATAGGAATACATTGCATGAGATATTAGATAGTAGCGCAGGCGATTGGCCTTTCTTTCAGGCTAAGCAACTGGCACGCTTGGGTTTGAGGTGCTGTGGGATTGATAGAAGAAAACGGCCACATCTTGTTGAAGATGTTTGGAGAGTGCTCTTGTCGGTTATGAAGGTGGCATCGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008804030.1	8.0e-127	U-box domain-containing protein 33-like
Swissprot	Q8GUH1.2	6.2e-100	Serine/threonine-protein kinase
trEMBL	A0A8B7CQB5	5.8e-127	U-box domain-containing protein 33-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G45910.1	52.69	3e-106	381		U-box domain-containing protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G03354	AT2G45910.1	372	168	3	2	370	374	740	52.69	3e-106	381
AfisC8G03354	AT5G61550.2	350	180	6	40	377	415	761	44.29	5e-77	285
AfisC8G03354	AT5G61550.1	350	180	6	40	377	415	761	44.29	6e-77	284

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	109	361	147.0	5.7e-43

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0002229	P	defense response to oomycetes
GO:0004672	F	protein kinase activity
GO:0004842	F	ubiquitin-protein transferase activity
GO:0016567	P	protein ubiquitination
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006468	P	protein phosphorylation
GO:0010726	P	positive regulation of hydrogen peroxide metabolic process
GO:0010942	P	positive regulation of cell death

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network