result

Gene information

Detail information of AfisC8G03675

Location

Gene	Chr	Start	End	Strand
AfisC8G03675	chr8	680938789	680940574	+

Sequences

CDS

>AfisC8G03675
ATGCTTCGCATCCTTCTTCATTCTTCCATGAACAAGACCTTCACAGAAGCATGCTATTCAACTTCAATTGATCCATCATCGTCTCTAACCCTTCATTTCCTGAAAAACTCATGCGGCCTTTCTCAAGAAACCGCACTCACCGTCTCCAAAAAGATCCATTTCAAACGAACAAAAACACCTCACGCAGTCGTCTCCCTTCTCAAATCCTTCAACTTTTCAAAACCCGATATCAAAAAGGTCGTAACCCGCTTCCCAGAACTCCTCTTAAGGAACCCTGACAAGTTCGTGAAGCCCAAACTCGACTTTCTGAACAACATCGGGTTCTCGGGCCCTGCATTAGTCTACCTCCTCACTTGTGTTCCGAAATTGCTCCGACCCGACTTAGAAAAGAAGCTCCTTCCGAACTACAAAATCCTGAAAGATGTTCTAAAGACAGATGAAAATGTTAAGTCTGCAATAACAAGCTCCACTGCATTGCTTCTGATGGACCTTGAAAAGAAACTGCTTCCCAAGTTAAAGCTTCTTGAAGAGAATGGAGTTTCAGTCGATGTCGTGAACAAGTTATTGACAATGCGTTCAGATTGTTTAGTTGGGAGGAGTGATAGGTTTGATGAGATATTTGAGTTTGTTAAAAAGACAGGGATTAGTACGAAAAGTTCAATGTATGCACATGCATTTTCTGTGCTTGGTAGAATGGGGAAGACCGAGTGGGAAGTGAAAGTTGAGAATTTTAAGAAGTTAGGATGGAGTGAAGAAGATATCATGATTGCATTCATGAAACATCCTTATTGCATGAGTGCTTCAACGGATAAAATTGTGAAGAATTTCCAGTTTTATAAGGAGGAGTTTGGCTGGGATTCAGTTTATGTGTCTAGGAATGCTGCTATGCTTTCATATAGTTTTGAGAAAAGAGTTTTGCCGCGATACAGACTTTTAAATATGTTGCAAAGAAAAGGGTTGTACAAGGGACAATTTGCAGCAAGGCACTTAACATTAGGGGAGAAGCGTTTCTTGGTGAATTATGTTATGAAAAATTACAAAGAGGTCTCGGAGCTGATCGATGATGAAATTAGGTGTAGATTAGAAATTTTGGGGTTGGTGAACTACAATGTTATGTAG

Protein

Gene

>AfisC8G03675
TTTTTCACACCTTCTCTCCTCTCCTCTCCTCTCCTCTTCTTCAAAGAATAAGCAAAACATAAATTTAAATATAAGTCAGAAGGACCTTCATTCTAAATCAATTCGCGTTCATTCAGTAACATCCAAAACCAGGCGGCGGGTACTTTTGCGTTGCGAATTTGAATCTTCCTTCCATTATCATTCCTCTTGAGGAGTAAAACTTGTATACCGACAAAAGTACAATAATTGCACACAAGTTGTGCGTTGAAATTCCCAGTCCAGAAATCCAAAATGCTTCGCATCCTTCTTCATTCTTCCATGAACAAGACCTTCACAGAAGCATGCTATTCAACTTCAATTGATCCATCATCGTCTCTAACCCTTCATTTCCTGAAAAACTCATGCGGCCTTTCTCAAGAAACCGCACTCACCGTCTCCAAAAAGATCCATTTCAAACGAACAAAAACACCTCACGCAGTCGTCTCCCTTCTCAAATCCTTCAACTTTTCAAAACCCGATATCAAAAAGGTCGTAACCCGCTTCCCAGAACTCCTCTTAAGGAACCCTGACAAGTTCGTGAAGCCCAAACTCGACTTTCTGAACAACATCGGGTTCTCGGGCCCTGCATTAGTCTACCTCCTCACTTGTGTTCCGAAATTGCTCCGACCCGACTTAGAAAAGAAGCTCCTTCCGAACTACAAAATCCTGAAAGATGTTCTAAAGACAGATGAAAATGTTAAGTCTGCAATAACAAGCTCCACTGCATTGCTTCTGATGGACCTTGAAAAGAAACTGCTTCCCAAGTTAAAGCTTCTTGAAGAGAATGGAGTTTCAGTCGATGTCGTGAACAAGTTATTGACAATGCGTTCAGATTGTTTAGTTGGGAGGAGTGATAGGTTTGATGAGATATTTGAGTTTGTTAAAAAGACAGGGATTAGTACGAAAAGTTCAATGTATGCACATGCATTTTCTGTGCTTGGTAGAATGGGGAAGACCGAGTGGGAAGTGAAAGTTGAGAATTTTAAGAAGTTAGGATGGAGTGAAGAAGATATCATGATTGCATTCATGAAACATCCTTATTGCATGAGTGCTTCAACGGATAAAATTGTGAAGAATTTCCAGTTTTATAAGGAGGAGTTTGGCTGGGATTCAGTTTATGTGTCTAGGAATGCTGCTATGCTTTCATATAGTTTTGAGAAAAGAGTTTTGCCGCGATACAGACTTTTAAATATGTTGCAAAGAAAAGGGTTGTACAAGGGACAATTTGCAGCAAGGCACTTAACATTAGGGGAGAAGCGTTTCTTGGTGAATTATGTTATGAAAAATTACAAAGAGGTCTCGGAGCTGATCGATGATGAAATTAGGTGTAGATTAGAAATTTTGGGGTTGGTGAACTACAATGTTATGTAGTCCATTTCACTACCTCATAATGTATGTGCTGATGATGGTGGTTTCATAGATAATACTTCTGGTTAGTATGTTGTACTATGATGGTGTTAACAGAATTTACCTTTGGAAATGTACCCTTTCAAAATTATTTTATCATTACTGGTTATAATTGAAATATAATAATTCATCTTTCTTCATTACTCAGGTTTAGCAACACTTGGTTGGAGAATGATACATATTTCAGATTGGATGATGGCAGCATTCCTTATTCAAACATAGAAGGCTGAACTGACTTTGGAGGAATTGTTAATGATCACTTTCATATGGCAGCAGATCACATTGGCAGAGTAAATTATATTTTATTTATAACATTTGTATCATCCTAACTCCACTGGCCTTTCTAACGTTTTGATCAAAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010943661.1	5.4e-59	uncharacterized protein LOC105061347
trEMBL	A0A6I9SIF7	3.9e-59	uncharacterized protein LOC105061347

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G07900.1	32.34	1e-46	183		Mitochondrial transcription termination factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G03675	AT5G07900.1	334	224	2	28	359	69	402	32.34	1e-46	183
AfisC8G03675	AT1G21150.1	331	231	2	28	354	56	384	28.40	2e-37	153
AfisC8G03675	AT5G64950.1	352	247	5	19	359	27	377	26.42	3e-28	122

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02536.11	mTERF	Family	65	218	62.6	2.7e-17
PF02536.11	mTERF	Family	153	321	61.5	5.8e-17

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15032	MTERFD; mTERF domain-containing protein, mitochondrial	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network