result

Gene information

Detail information of AfisC8G04500

Location

Gene	Chr	Start	End	Strand
AfisC8G04500	chr8	838392504	838395015	+

Sequences

CDS

>AfisC8G04500
ATGAGTAACAAAAAACACCATGAAATTCTTCTAAACAAATACGAGCTTGGGCGCCTGCTAGGTCGAGGCACATTTGCAAAAGTATACTATGCAAAGTCACTTCCAGACAACTCATCAGTGGCTATCAAAGTGCTGGAGAAGCCTGAAATAGTAAAATCAGGCGTTGCTCCCATGATCATTCGAGAAGTTTCTGCTATGCGCCGCCTTGCTCATCATCCTAATATTTTAAGACTGCATGAAGTCATGGCTACAAAATCAAAGATATATCTTGTTATGGAACATGCTAAAGGCGGCGAGCTCTTTGCCCGCCTTGCTCTTAGGGGTAGATTGCCTGAACCAGTAGCAAAAAGGTACTTTCAGCAGCTAATTGCTGCATTGAGATTCTGCCATGCGCATGGGATAGCACATCGTGATTTGAAACCTGAAAACTTACTGCTTGACCGCGATGGCAACTTAAAGCTGTCGGATTTTGGACTGTCGGCGCTCTCTGATCATCAGAGAGTTGACGGGCTTCTGCACACAACATGTGGCACGCCTGCTTACACTGCTCCTGAAGTTATTCGTAGAAAAGGATATGATGGAGCTAAAGCTGATGCTTGGTCTTGTGGCGTTATTCTCTATGTGCTTCTTGCAGGTTTTTTGCCATTTGACGATTCAAATCTGGTAACCATGTACCGAAGAATCCAAAAGAGAGAATACCAATTCCCACCATGGTTCTCTCCATCAACAAAGCGGGTCATATACAAGCTTCTCGACCCAAACCCAGCGACCCGGATCACAATAGACGGGTTAATGGATCTTCCATGGATAAGAAGATCATATAGCCTAGACGAAAAGCTAGATTTGCTTTCATACTTGCCACCACTTCCACCCTCATCTTCTTCTTTCTCATCTCCTCCATCCTTGAACGCATTCGACATCATATCACTGTCATCCGGATTAAATTTATCAGGCTTGTTTCAAGACGGCCACAGTAAAAGTGAAAGGAAATTTACATCCATGGCCGGTTTTGAAAAAATAATGGACAAAATCGAGGTGGTATGCGCAAAGTTTGGATACATGGTTGAAAAGAGAAAATGCGGAGTTGTAGGGAGAGGTAAATGGGGTGTCGTTATATCATTCGAGGTGTCGGAAGTGGCATCGGAGATTCTTTTGGTCGAGATGAAAATTGAAGGAGACTGCAGTTCCAAGTTGTGTTGGAATGAGTTAAGAGAAGAGTTTGGAGATGTGGTTTTTTCTTGGCATAAAAATGAAGATTTATGA

Protein

Gene

>AfisC8G04500
ATCCTTCCCTCTTTATTAACCAACCCTTCTTCTCTTATTTCTCACCAAACCAAAAACTTAAAAATAAAATAAAATGAGTAACAAAAAACACCATGAAATTCTTCTAAACAAATACGAGCTTGGGCGCCTGCTAGGTCGAGGCACATTTGCAAAAGTATACTATGCAAAGTCACTTCCAGACAACTCATCAGTGGCTATCAAAGTGCTGGAGAAGCCTGAAATAGTAAAATCAGGCGTTGCTCCCATGATCATTCGAGAAGTTTCTGCTATGCGCCGCCTTGCTCATCATCCTAATATTTTAAGACTGCATGAAGTCATGGCTACAAAATCAAAGATATATCTTGTTATGGAACATGCTAAAGGCGGCGAGCTCTTTGCCCGCCTTGCTCTTAGGGGTAGATTGCCTGAACCAGTAGCAAAAAGGTACCATCTTTATCTATATTAACTGTAATTTAACTATATTTAACGTAAGAAGCTGTATGAATTTTGAATGATTTCAGGTACTTTCAGCAGCTAATTGCTGCATTGAGATTCTGCCATGCGCATGGGATAGCACATCGTGATTTGAAACCTGAAAACTTACTGCTTGACCGCGATGGCAACTTAAAGCTGTCGGATTTTGGACTGTCGGCGCTCTCTGATCATCAGAGAGTTGACGGGCTTCTGCACACAACATGTGGCACGCCTGCTTACACTGCTCCTGAAGTTATTCGTAGAAAAGGATATGATGGAGCTAAAGCTGATGCTTGGTCTTGTGGCGTTATTCTCTATGTGCTTCTTGCAGGTCTTTTCTATTTTTAATACTATTGGCCAATCTATAATCTTCTAGTCGATAGTACATGCTCATAAGATAGTACAAGTATTGATTTGATATATTGGTCTAGATCATCAACTGTTGTATTTTATAATATTCTATGCTAAAATGCAATGATTGATCAAGATCGTTAGGCCATCTACAGCAACCCTGAAAATGCAAAGGCACTTTATTTTCCAATTTTGAACGTCCATTAAATCAGCTTGTGTTAGATATTTCTTGAACTCTTGACCCCTGAACGTTAATTTTTTGAACATTGGACGTCCAAAAAATGAACGTTCTACTTGCTTCAGTTTTCTGTTTTCCCTAACAGACAACCATAATTTAACTGAATATCAAGCTGAATTGATCCTGTTGACCTTAAATGAACTGAATATTCAGTTGAATTTTGCGTTCATCTTAGATGTCCTTGGATTTCTTTTATTCTATGGCTAAAATCAGTTGGGTAAACCTCTGTTTTAGAATGTGTATTTAACATGCTCTTTGTTTTGAAACACTTAACAGTTCAATATGCATCATTTGATCTATTTTAGATTACTCTTGGTTTAAACAGCCTATAAGCAACGGGTGCATATGATAATCAAAAGCAAATGTGATTATGGTTTCATTAATGAAGTCTTTTAAATATCAACTTGTCATCAAAACATTATTTAATGTATATAGTTAAAATGTTTTCTTTCAACTATAGTAAAAAAAACAACATCAAAATTGACCTTTTTTTTTCTTTTAAAAAGCAAAAAACAGTTAGTTTTTGAAAGCCGTTCCTAAACAAAGATTTCCATGCAGGTTTTTTGCCATTTGACGATTCAAATCTGGTAACCATGTACCGAAGAATCCAAAAGAGAGAATACCAATTCCCACCATGGTTCTCTCCATCAACAAAGCGGGTCATATACAAGCTTCTCGACCCAAACCCAGCGACCCGGATCACAATAGACGGGTTAATGGATCTTCCATGGATAAGAAGATCATATAGCCTAGACGAAAAGCTAGATTTGCTTTCATACTTGCCACCACTTCCACCCTCATCTTCTTCTTTCTCATCTCCTCCATCCTTGAACGCATTCGACATCATATCACTGTCATCCGGATTAAATTTATCAGGCTTGTTTCAAGACGGCCACAGTAAAAGTGAAAGGAAATTTACATCCATGGCCGGTTTTGAAAAAATAATGGACAAAATCGAGGTGGTATGCGCAAAGTTTGGATACATGGTTGAAAAGAGAAAATGCGGAGTTGTAGGGAGAGGTAAATGGGGTGTCGTTATATCATTCGAGGTGTCGGAAGTGGCATCGGAGATTCTTTTGGTCGAGATGAAAATTGAAGGAGACTGCAGTTCCAAGTTGTGTTGGAATGAGTTAAGAGAAGAGTTTGGAGATGTGGTTTTTTCTTGGCATAAAAATGAAGATTTATGACAATGTGTTGTTGAATATTTTATATCGAAGTATTTTGCAATGAGTTAAGAGAGGAGTTTGAAGAAGAAGAAGAACAAATGCATATTCAAAATCATCTCTACCTTTTTACATTGGAGTATTTTGCAATGTGGTTTGCGTAATAATGTTCTTTTGCCTCTGTAATCAATAATGTTGCTGTGGAAAATGTATTGATCTTTCTAACTATTTTTTGATGTAAATTCATTCTGTTACGCTTTCAGATTGCAACAATCTGTACACTCCTCTGTATTGATATTGAATAAAC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010936028.1	2.5e-153	CBL-interacting protein kinase 7
Swissprot	Q9XIW0.1	3.2e-121	Serine/threonine-protein kinase SR2
trEMBL	A0A6I9S1H4	1.8e-153	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G23000.1	53.12	3e-121	432	ATSR2;ATSRPK1;CIPK7;PKS7;SnRK3.10	CBL-interacting protein kinase 7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G04500	AT3G23000.1	416	182	4	8	417	19	427	53.12	3e-121	432
AfisC8G04500	AT4G14580.1	417	182	5	9	415	16	425	52.28	6e-120	427
AfisC8G04500	AT5G01810.2	428	195	6	4	415	2	421	48.83	4e-112	401

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	14	270	227.7	1.4e-67
PF03822.11	NAF	Domain	299	357	64.7	5.7e-18

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005986	P	sucrose biosynthetic process
GO:0006468	P	protein phosphorylation
GO:0006979	P	response to oxidative stress
GO:0007275	P	multicellular organism development
GO:0009409	P	response to cold
GO:0009414	P	response to water deprivation
GO:0009507	C	chloroplast
GO:0009737	P	response to abscisic acid
GO:0010325	P	raffinose family oligosaccharide biosynthetic process
GO:0010540	P	basipetal auxin transport
GO:0018193	P	peptidyl-amino acid modification
GO:0019593	P	mannitol biosynthetic process
GO:0042538	P	hyperosmotic salinity response

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Bacterial secretion system	ko03070
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Biofilm formation - Pseudomonas aeruginosa	ko02025

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network