result

Gene information

Detail information of AfisC8G04518


Location
GeneChrStartEndStrand
AfisC8G04518chr8841563297841564189-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008788132.19.5e-54auxin-induced protein 22D-like
SwissprotO24542.19.9e-48Indole-3-acetic acid-induced protein ARG13
trEMBLA0A8K0MYJ95.3e-54Auxin-responsive protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT1G04240.154.101e-47 185IAA3;SHY2AUX/IAA transcriptional regulator family protein

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Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02309.13AUX_IAAFamily33176178.91.4e-52

Gene Ontology
AccessionOntologyName
GO:0001101Presponse to acid chemical
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0003993Facid phosphatase activity
GO:0005634Cnucleus
GO:0005740Cmitochondrial envelope
GO:0005768Cendosome
GO:0005802Ctrans-Golgi network
GO:0006109Pregulation of carbohydrate metabolic process
GO:0006355Pregulation of transcription, DNA-templated
GO:0006417Pregulation of translation
GO:0006950Presponse to stress
GO:0046983Fprotein dimerization activity
GO:0009733Presponse to auxin
GO:0009941Cchloroplast envelope
GO:0044212Ftranscription regulatory region DNA binding
GO:0030943Fmitochondrion targeting sequence binding
GO:0045040Pprotein import into mitochondrial outer membrane
GO:0080167Presponse to karrikin
GO:1901700Presponse to oxygen-containing compound

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14484IAA; auxin-responsive protein IAAEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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